Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3923

Experiment: Spectinomycin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.025 mg/ml
4,712,795	+		Shewana3_3922	0.15	+1.3
4,712,803	-		Shewana3_3922	0.15	+0.2
4,712,863	-		Shewana3_3922	0.22	+0.2
4,712,877	+		Shewana3_3922	0.23	+0.4
4,712,877	+		Shewana3_3922	0.23	+1.0
4,713,283	+		Shewana3_3922	0.64	+0.2
4,713,283	+		Shewana3_3922	0.64	+0.3
4,713,306	-		Shewana3_3922	0.67	-0.1
4,713,388	-		Shewana3_3922	0.75	-0.5
4,713,438	+		Shewana3_3922	0.80	+0.9
4,713,443	+		Shewana3_3922	0.80	+0.6
4,713,478	-		Shewana3_3922	0.84	+0.7
4,713,520	+		Shewana3_3922	0.88	+0.8
4,713,539	+				-0.6
4,713,569	+				+0.5
4,713,724	+				+0.3
4,714,215	-		Shewana3_3923	0.24	+0.6
4,714,243	-		Shewana3_3923	0.26	+0.3
4,714,351	+		Shewana3_3923	0.31	-1.1
4,714,351	+		Shewana3_3923	0.31	-0.1
4,714,419	-		Shewana3_3923	0.34	-0.1
4,714,580	-		Shewana3_3923	0.42	-0.5
4,714,580	-		Shewana3_3923	0.42	+0.6
4,714,613	-		Shewana3_3923	0.44	+0.1
4,714,637	-		Shewana3_3923	0.45	+0.5
4,714,726	-		Shewana3_3923	0.49	+0.1
4,714,726	-		Shewana3_3923	0.49	-0.1
4,714,739	+		Shewana3_3923	0.50	-1.1
4,714,739	+		Shewana3_3923	0.50	-0.9
4,714,739	+		Shewana3_3923	0.50	+0.3
4,714,747	-		Shewana3_3923	0.50	+0.4
4,714,747	-		Shewana3_3923	0.50	-0.6
4,714,747	-		Shewana3_3923	0.50	-0.4
4,714,747	-		Shewana3_3923	0.50	-0.2
4,714,763	+		Shewana3_3923	0.51	-0.1
4,714,771	-		Shewana3_3923	0.51	+0.2
4,714,771	-		Shewana3_3923	0.51	+0.3
4,714,775	+		Shewana3_3923	0.52	+2.8
4,714,975	-		Shewana3_3923	0.61	+1.4
4,715,121	-		Shewana3_3923	0.68	-0.1
4,715,444	-		Shewana3_3923	0.84	-0.4
4,715,536	-		Shewana3_3923	0.88	+0.1
4,715,681	-				+1.5
4,715,689	+				+0.2
4,715,697	-				+0.9
4,715,961	-				-0.5
4,715,998	+				-0.3
4,716,066	+				-0.5
4,716,130	+				-0.3
4,716,130	+				-0.9
4,716,310	+				+0.3
4,716,604	+		Shewana3_3924	0.13	-1.9
4,716,612	-		Shewana3_3924	0.13	+0.5
4,716,612	-		Shewana3_3924	0.13	+0.3
4,716,760	+		Shewana3_3924	0.23	-0.8