Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3910

Experiment: Spectinomycin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.025 mg/ml
4,697,730	+				-1.0
4,697,730	+				+0.2
4,697,738	-				-0.0
4,697,738	-				-0.1
4,697,756	+				-1.2
4,697,772	+				-1.1
4,697,811	-				+0.2
4,697,854	+				-1.8
4,697,895	-		Shewana3_3909	0.14	+0.0
4,697,942	+		Shewana3_3909	0.20	-0.4
4,698,056	-		Shewana3_3909	0.32	+0.2
4,698,127	-		Shewana3_3909	0.40	+1.1
4,698,149	+		Shewana3_3909	0.42	-1.7
4,698,150	-		Shewana3_3909	0.42	+0.1
4,698,236	+		Shewana3_3909	0.52	-0.6
4,698,261	+		Shewana3_3909	0.55	+0.6
4,698,261	+		Shewana3_3909	0.55	-0.5
4,698,269	-		Shewana3_3909	0.56	-0.7
4,698,269	-		Shewana3_3909	0.56	-0.3
4,698,319	-		Shewana3_3909	0.61	+0.2
4,698,330	+		Shewana3_3909	0.62	+0.3
4,698,349	+		Shewana3_3909	0.64	-0.4
4,698,391	+		Shewana3_3909	0.69	-0.3
4,698,391	+		Shewana3_3909	0.69	-0.9
4,698,399	-		Shewana3_3909	0.70	+0.3
4,698,450	-		Shewana3_3909	0.76	+0.2
4,698,489	-		Shewana3_3909	0.80	-0.0
4,698,507	+		Shewana3_3909	0.82	-1.0
4,698,587	+				-0.4
4,698,618	-				-0.1
4,698,685	+				-3.2
4,698,959	+		Shewana3_3910	0.26	+0.2
4,698,964	+		Shewana3_3910	0.26	+1.0
4,699,004	+		Shewana3_3910	0.31	-0.6
4,699,012	-		Shewana3_3910	0.32	+0.5
4,699,127	+		Shewana3_3910	0.45	-0.0
4,699,149	+		Shewana3_3910	0.47	-0.0
4,699,149	+		Shewana3_3910	0.47	+0.5
4,699,157	-		Shewana3_3910	0.48	+1.8
4,699,172	-		Shewana3_3910	0.50	+0.5
4,699,175	+		Shewana3_3910	0.50	-1.0
4,699,276	+		Shewana3_3910	0.61	-0.7
4,699,284	-		Shewana3_3910	0.62	+0.6
4,699,366	+		Shewana3_3910	0.71	-0.1
4,699,439	+		Shewana3_3910	0.79	+1.3
4,699,655	-				-0.6
4,699,676	+				-1.3
4,699,870	-				+0.0
4,699,941	-				-0.3
4,700,056	+		Shewana3_3911	0.29	-0.3
4,700,056	+		Shewana3_3911	0.29	+0.3
4,700,056	+		Shewana3_3911	0.29	+0.8
4,700,056	+		Shewana3_3911	0.29	+1.8
4,700,064	-		Shewana3_3911	0.31	+0.5
4,700,064	-		Shewana3_3911	0.31	+0.6
4,700,064	-		Shewana3_3911	0.31	+0.2
4,700,064	-		Shewana3_3911	0.31	+0.3
4,700,064	-		Shewana3_3911	0.31	+0.2
4,700,064	-		Shewana3_3911	0.31	+0.3
4,700,064	-		Shewana3_3911	0.31	+0.4
4,700,064	-		Shewana3_3911	0.31	+0.5
4,700,083	-		Shewana3_3911	0.35	+0.6
4,700,083	-		Shewana3_3911	0.35	+0.5
4,700,188	-		Shewana3_3911	0.58	+1.2
4,700,188	-		Shewana3_3911	0.58	+0.6
4,700,277	-		Shewana3_3911	0.77	+1.2
4,700,444	-				+0.5