Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3867

Experiment: Spectinomycin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.025 mg/ml
4,643,593	+		Shewana3_3866	0.57	-1.4
4,643,601	-		Shewana3_3866	0.57	-1.0
4,643,601	-		Shewana3_3866	0.57	-0.4
4,643,601	-		Shewana3_3866	0.57	+0.4
4,643,672	-		Shewana3_3866	0.62	-0.4
4,643,674	+		Shewana3_3866	0.62	+0.4
4,643,795	+		Shewana3_3866	0.71	+0.1
4,643,881	-		Shewana3_3866	0.77	+0.2
4,643,899	-		Shewana3_3866	0.78	+1.2
4,643,934	-		Shewana3_3866	0.81	+1.4
4,644,053	+		Shewana3_3866	0.89	-0.8
4,644,061	-				+0.5
4,644,123	-				-0.4
4,644,215	-				+0.5
4,644,382	+				+0.1
4,644,382	+				+0.0
4,644,390	-				-1.4
4,644,400	-				-0.7
4,644,462	+		Shewana3_3867	0.24	-1.6
4,644,465	-		Shewana3_3867	0.25	-0.2
4,644,469	+		Shewana3_3867	0.26	-2.6
4,644,645	-		Shewana3_3867	0.76	-0.1
4,644,765	+				+0.2
4,644,773	-				-0.1
4,644,773	-				+1.0
4,644,899	-		Shewana3_3868	0.18	-0.6
4,644,911	-		Shewana3_3868	0.20	+0.2
4,645,045	+		Shewana3_3868	0.38	+0.4
4,645,053	-		Shewana3_3868	0.39	-0.4
4,645,053	-		Shewana3_3868	0.39	+0.6
4,645,063	-		Shewana3_3868	0.40	+0.4
4,645,154	+		Shewana3_3868	0.52	-0.4
4,645,154	+		Shewana3_3868	0.52	+0.2
4,645,164	+		Shewana3_3868	0.53	-0.1
4,645,167	-		Shewana3_3868	0.54	-0.3
4,645,172	-		Shewana3_3868	0.54	+0.4
4,645,179	-		Shewana3_3868	0.55	+0.1
4,645,264	+		Shewana3_3868	0.66	+0.0
4,645,284	-		Shewana3_3868	0.69	+0.0
4,645,315	-		Shewana3_3868	0.73	+1.1
4,645,445	+				+0.2
4,645,496	-				+0.2
4,645,515	-				+0.3
4,645,552	+				-0.0
4,645,559	+				-0.2
4,645,559	+				-0.1
4,645,567	-				+0.4
4,645,567	-				+0.5
4,645,567	-				-0.4
4,645,577	-				+0.3
4,645,577	-				+0.3
4,645,577	-				+0.3
4,645,577	-				+0.7
4,645,577	-				+0.8
4,645,590	+				-1.6
4,645,661	+		Shewana3_3869	0.23	+0.4
4,645,661	+		Shewana3_3869	0.23	-0.6
4,645,669	-		Shewana3_3869	0.24	+0.9
4,645,671	+		Shewana3_3869	0.25	+0.3
4,645,717	+		Shewana3_3869	0.33	-0.8