Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3826

Experiment: Spectinomycin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.025 mg/ml
4,592,512	-	prpB	Shewana3_3825	0.24	-0.5
4,592,565	+	prpB	Shewana3_3825	0.30	+0.4
4,592,565	+	prpB	Shewana3_3825	0.30	+2.1
4,592,573	-	prpB	Shewana3_3825	0.31	-0.3
4,592,573	-	prpB	Shewana3_3825	0.31	+0.9
4,592,573	-	prpB	Shewana3_3825	0.31	+0.3
4,592,695	+	prpB	Shewana3_3825	0.44	+1.1
4,592,861	+	prpB	Shewana3_3825	0.63	+0.2
4,592,870	-	prpB	Shewana3_3825	0.64	+0.0
4,593,004	-	prpB	Shewana3_3825	0.80	-0.5
4,593,013	-	prpB	Shewana3_3825	0.81	+0.5
4,593,059	+	prpB	Shewana3_3825	0.86	+0.5
4,593,084	+	prpB	Shewana3_3825	0.89	+0.8
4,593,084	+	prpB	Shewana3_3825	0.89	+1.0
4,593,084	+	prpB	Shewana3_3825	0.89	+2.0
4,593,084	+	prpB	Shewana3_3825	0.89	+1.1
4,593,084	+	prpB	Shewana3_3825	0.89	+0.8
4,593,092	-	prpB	Shewana3_3825	0.90	-0.3
4,593,092	-	prpB	Shewana3_3825	0.90	-0.0
4,593,096	+				+0.2
4,593,096	+				+1.2
4,593,096	+				+1.4
4,593,104	-				+1.0
4,593,104	-				+0.3
4,593,106	+				+0.5
4,593,222	-				-1.3
4,593,240	+				+1.0
4,593,367	+				+0.4
4,593,506	+				-0.3
4,593,608	-		Shewana3_3826	0.17	-1.4
4,593,687	-		Shewana3_3826	0.24	-0.5
4,593,707	+		Shewana3_3826	0.26	+0.0
4,593,750	-		Shewana3_3826	0.30	-1.5
4,593,759	+		Shewana3_3826	0.30	-0.2
4,594,158	-		Shewana3_3826	0.66	-0.6
4,594,175	-		Shewana3_3826	0.67	-0.3
4,594,310	+		Shewana3_3826	0.79	+0.9
4,594,354	+		Shewana3_3826	0.83	-0.1
4,594,354	+		Shewana3_3826	0.83	+0.3
4,594,399	+		Shewana3_3826	0.87	+0.4
4,594,503	+				+0.7
4,594,503	-				-0.6
4,594,513	+				+0.1
4,594,585	+				+0.8
4,594,768	+				-0.5
4,594,768	+				-0.9
4,594,776	-				-0.5
4,594,776	-				+0.7
4,594,776	-				+0.1
4,594,776	-				+0.2
4,594,987	+		Shewana3_3827	0.12	-0.9
4,594,987	+		Shewana3_3827	0.12	-0.4
4,594,995	-		Shewana3_3827	0.13	-0.1
4,594,995	-		Shewana3_3827	0.13	+0.2
4,595,000	+		Shewana3_3827	0.13	+0.4
4,595,092	-		Shewana3_3827	0.16	-0.1
4,595,092	-		Shewana3_3827	0.16	+0.1
4,595,175	-		Shewana3_3827	0.20	+0.2
4,595,519	-		Shewana3_3827	0.33	-1.1
4,595,519	-		Shewana3_3827	0.33	-0.5