Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3630

Experiment: Spectinomycin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.025 mg/ml
4,356,816	+		Shewana3_3629	0.20	+0.7
4,356,829	+		Shewana3_3629	0.21	+0.6
4,357,239	-		Shewana3_3629	0.70	-0.0
4,357,239	-		Shewana3_3629	0.70	-0.6
4,357,268	+		Shewana3_3629	0.73	-0.1
4,357,340	+		Shewana3_3629	0.81	-2.6
4,357,348	-		Shewana3_3629	0.82	-0.2
4,357,467	-				+0.1
4,357,514	-				+1.0
4,357,567	+				-0.5
4,357,697	+				+1.0
4,357,704	+				+1.1
4,357,704	+				+0.4
4,357,704	+				+0.6
4,357,704	+				+0.3
4,357,724	+				+2.2
4,357,765	-				+0.3
4,357,796	-				+0.5
4,357,864	+				+2.6
4,357,864	+				+1.7
4,358,293	-		Shewana3_3630	0.29	+0.6
4,358,329	-		Shewana3_3630	0.30	+0.7
4,358,654	-		Shewana3_3630	0.46	+1.9
4,358,829	+		Shewana3_3630	0.54	+1.6
4,359,068	+		Shewana3_3630	0.65	+1.0
4,359,068	+		Shewana3_3630	0.65	+1.7
4,359,092	+		Shewana3_3630	0.66	+1.9
4,359,104	+		Shewana3_3630	0.67	+1.5
4,359,202	+		Shewana3_3630	0.71	+1.8
4,359,210	-		Shewana3_3630	0.72	+0.0
4,359,210	-		Shewana3_3630	0.72	-1.5
4,359,252	-		Shewana3_3630	0.73	+1.0
4,359,252	-		Shewana3_3630	0.73	+2.5
4,359,274	-		Shewana3_3630	0.75	+0.8
4,359,310	-		Shewana3_3630	0.76	+0.4
4,359,368	+		Shewana3_3630	0.79	+1.5
4,359,506	+		Shewana3_3630	0.85	+1.3
4,359,573	+		Shewana3_3630	0.88	+1.6
4,359,573	+		Shewana3_3630	0.88	+1.7
4,359,578	+		Shewana3_3630	0.89	+1.5
4,359,581	-		Shewana3_3630	0.89	+0.7
4,359,586	-		Shewana3_3630	0.89	+0.0
4,359,719	+				+1.6
4,359,845	+				+0.2
4,359,850	+				+0.8
4,359,853	-				-1.3
4,359,886	-				-1.1
4,360,056	-				+1.1
4,360,202	+		Shewana3_3631	0.18	-0.7
4,360,202	+		Shewana3_3631	0.18	-1.3
4,360,214	+		Shewana3_3631	0.19	-0.1
4,360,221	+		Shewana3_3631	0.19	-0.6
4,360,241	+		Shewana3_3631	0.21	-0.7
4,360,276	-		Shewana3_3631	0.23	+0.2
4,360,381	-		Shewana3_3631	0.31	+0.5
4,360,552	+		Shewana3_3631	0.44	-0.5
4,360,555	-		Shewana3_3631	0.44	+1.7
4,360,574	+		Shewana3_3631	0.45	-1.2
4,360,574	+		Shewana3_3631	0.45	+0.2
4,360,602	+		Shewana3_3631	0.47	-0.3
4,360,620	-		Shewana3_3631	0.49	+1.1
4,360,696	-		Shewana3_3631	0.54	-0.2