Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3627

Experiment: Spectinomycin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.025 mg/ml
4,353,473	+		Shewana3_3626	0.25	+0.6
4,353,589	+		Shewana3_3626	0.42	+0.4
4,353,597	-		Shewana3_3626	0.43	-0.3
4,353,602	+		Shewana3_3626	0.43	+0.5
4,353,641	-		Shewana3_3626	0.49	+0.6
4,353,669	+		Shewana3_3626	0.53	-0.5
4,353,726	-		Shewana3_3626	0.61	-0.1
4,353,772	-		Shewana3_3626	0.67	-0.6
4,353,801	+		Shewana3_3626	0.71	+0.2
4,353,801	+		Shewana3_3626	0.71	+0.3
4,353,900	-		Shewana3_3626	0.85	-0.0
4,354,052	-				+0.6
4,354,214	+				-0.7
4,354,222	-				+1.3
4,354,227	-				+0.4
4,354,236	+				+1.1
4,354,236	+				+0.1
4,354,244	-				+0.2
4,354,510	-				+0.3
4,354,515	-				-0.8
4,354,586	-		Shewana3_3627	0.11	-0.8
4,354,711	-		Shewana3_3627	0.20	-1.6
4,354,799	-		Shewana3_3627	0.26	-0.6
4,354,809	-		Shewana3_3627	0.27	+0.5
4,354,974	-		Shewana3_3627	0.38	-1.6
4,354,986	+		Shewana3_3627	0.39	-0.7
4,354,986	+		Shewana3_3627	0.39	-1.1
4,355,047	+		Shewana3_3627	0.43	-0.1
4,355,196	-		Shewana3_3627	0.53	-2.5
4,355,227	+		Shewana3_3627	0.56	-0.0
4,355,303	+		Shewana3_3627	0.61	+0.9
4,355,380	-		Shewana3_3627	0.66	-0.4
4,355,517	+		Shewana3_3627	0.76	-0.8
4,355,691	+		Shewana3_3627	0.88	+1.1
4,355,804	+				+1.4
4,355,825	+				+0.9
4,355,874	+				-0.0
4,355,882	-				-0.9
4,355,902	-				+1.1
4,355,994	+				-0.1
4,355,998	-				-0.2
4,356,031	+				-0.5
4,356,129	-				-0.5
4,356,334	+		Shewana3_3628	0.76	-0.8
4,356,381	+				+1.9
4,356,388	-				+0.6
4,356,455	+				-2.7
4,356,461	-				-2.3
4,356,477	+				+0.1
4,356,614	+				+0.8
4,356,816	+		Shewana3_3629	0.20	+0.7
4,356,829	+		Shewana3_3629	0.21	+0.6