Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3516

Experiment: Spectinomycin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.025 mg/ml
4,216,189	+		Shewana3_3515	0.16	-0.2
4,216,322	-		Shewana3_3515	0.29	+0.7
4,216,401	-		Shewana3_3515	0.36	+0.5
4,216,432	-		Shewana3_3515	0.39	-0.1
4,216,434	-		Shewana3_3515	0.39	-0.3
4,216,460	-		Shewana3_3515	0.42	-0.1
4,216,515	-		Shewana3_3515	0.47	-0.1
4,216,633	+		Shewana3_3515	0.58	-1.0
4,216,669	-		Shewana3_3515	0.62	-0.8
4,216,726	+		Shewana3_3515	0.67	-0.6
4,216,734	-		Shewana3_3515	0.68	-0.2
4,216,924	+		Shewana3_3515	0.86	+1.0
4,216,965	-				-0.2
4,216,982	-				+0.0
4,217,316	-		Shewana3_3516	0.15	-1.3
4,217,336	+		Shewana3_3516	0.17	-0.4
4,217,344	-		Shewana3_3516	0.17	-0.1
4,217,344	-		Shewana3_3516	0.17	+0.1
4,217,349	-		Shewana3_3516	0.17	-0.3
4,217,366	-		Shewana3_3516	0.18	+0.5
4,217,371	-		Shewana3_3516	0.19	+0.4
4,217,393	+		Shewana3_3516	0.20	-0.3
4,217,418	+		Shewana3_3516	0.22	-0.0
4,217,484	-		Shewana3_3516	0.26	+0.2
4,217,533	+		Shewana3_3516	0.29	-0.5
4,217,541	-		Shewana3_3516	0.29	-0.3
4,217,541	-		Shewana3_3516	0.29	+0.6
4,217,558	+		Shewana3_3516	0.30	+0.4
4,217,568	-		Shewana3_3516	0.31	-0.2
4,217,571	-		Shewana3_3516	0.31	+0.3
4,217,578	+		Shewana3_3516	0.31	-0.4
4,217,623	+		Shewana3_3516	0.34	-0.2
4,217,631	-		Shewana3_3516	0.35	+0.5
4,217,631	-		Shewana3_3516	0.35	+0.0
4,217,744	-		Shewana3_3516	0.41	-0.2
4,218,015	-		Shewana3_3516	0.58	-0.6
4,218,029	+		Shewana3_3516	0.59	+1.4
4,218,029	+		Shewana3_3516	0.59	+0.5
4,218,029	+		Shewana3_3516	0.59	+0.0
4,218,032	-		Shewana3_3516	0.59	+0.0
4,218,037	-		Shewana3_3516	0.59	-0.1
4,218,084	+		Shewana3_3516	0.62	-0.3
4,218,176	-		Shewana3_3516	0.68	+0.2
4,218,194	+		Shewana3_3516	0.69	+0.2
4,218,355	-		Shewana3_3516	0.79	+0.1
4,218,398	+		Shewana3_3516	0.81	+0.2
4,218,413	+		Shewana3_3516	0.82	-0.1
4,218,532	+		Shewana3_3516	0.90	+0.2
4,218,532	+		Shewana3_3516	0.90	-0.4
4,218,540	-				-0.1
4,218,540	-				-0.5
4,218,542	+				+0.1
4,218,575	-				+0.9
4,218,632	+				+1.2
4,218,707	+				+0.6
4,218,793	+				-0.7
4,218,860	+				-0.9
4,218,868	-				-1.2
4,218,868	-				+1.1
4,218,897	-		Shewana3_3517	0.12	+0.9
4,218,973	-		Shewana3_3517	0.19	-0.9
4,219,132	+		Shewana3_3517	0.35	-0.3
4,219,186	-		Shewana3_3517	0.40	-0.0
4,219,186	-		Shewana3_3517	0.40	+0.3
4,219,253	+		Shewana3_3517	0.47	-0.7
4,219,308	-		Shewana3_3517	0.53	+0.2
4,219,319	-		Shewana3_3517	0.54	-0.1
4,219,377	-		Shewana3_3517	0.59	+0.3
4,219,426	+		Shewana3_3517	0.64	-0.9
4,219,581	-		Shewana3_3517	0.80	-0.7