Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3144

Experiment: Spectinomycin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.025 mg/ml
3,768,503	+				+0.4
3,768,503	+				-0.4
3,768,511	-				-3.1
3,768,519	+				+0.1
3,768,569	-				-0.4
3,768,617	+				-0.9
3,768,794	+		Shewana3_3143	0.25	+0.1
3,768,930	-		Shewana3_3143	0.43	-0.4
3,769,012	-		Shewana3_3143	0.54	-1.1
3,769,073	+		Shewana3_3143	0.61	+0.4
3,769,073	+		Shewana3_3143	0.61	+2.0
3,769,166	-		Shewana3_3143	0.74	-1.4
3,769,199	-		Shewana3_3143	0.78	-0.8
3,769,251	+		Shewana3_3143	0.84	-0.4
3,769,407	-				+0.4
3,769,803	-		Shewana3_3144	0.22	+3.3
3,770,010	-		Shewana3_3144	0.36	+1.4
3,770,014	+		Shewana3_3144	0.37	+1.0
3,770,095	-		Shewana3_3144	0.42	+0.3
3,770,122	-		Shewana3_3144	0.44	+0.7
3,770,155	-		Shewana3_3144	0.46	+1.5
3,770,160	+		Shewana3_3144	0.46	-0.0
3,770,214	-		Shewana3_3144	0.50	+1.9
3,770,257	+		Shewana3_3144	0.53	+0.4
3,770,335	-		Shewana3_3144	0.58	+2.4
3,770,386	-		Shewana3_3144	0.62	+2.3
3,770,461	-		Shewana3_3144	0.67	+0.5
3,770,471	-		Shewana3_3144	0.68	+2.1
3,770,530	-		Shewana3_3144	0.72	+1.8
3,770,631	+		Shewana3_3144	0.79	-0.8
3,770,729	-		Shewana3_3144	0.85	+1.9
3,770,806	+				-0.0
3,770,814	-				+2.5
3,770,901	+				+1.0
3,770,909	-				+2.7
3,770,989	-				-0.2
3,771,097	-				+0.3
3,771,097	-				+1.1
3,771,158	+				+0.6
3,771,161	-				-0.2
3,771,206	-				-0.4
3,771,328	+				-0.9
3,771,351	-				+0.3
3,771,367	+				+0.9
3,771,524	-				+1.4
3,771,529	-				+1.5
3,771,539	+				-0.6
3,771,618	-		Shewana3_3145	0.10	-0.2
3,771,641	-		Shewana3_3145	0.11	+0.7
3,771,746	-		Shewana3_3145	0.16	-0.8
3,771,785	-		Shewana3_3145	0.17	-1.0
3,771,816	+		Shewana3_3145	0.19	+1.2
3,771,816	+		Shewana3_3145	0.19	-0.3
3,771,834	+		Shewana3_3145	0.19	+0.7
3,771,834	+		Shewana3_3145	0.19	-0.1
3,771,842	-		Shewana3_3145	0.20	-0.6
3,771,844	+		Shewana3_3145	0.20	-1.0
3,771,864	+		Shewana3_3145	0.21	+1.7