Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3022
Experiment: Spectinomycin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Spectinomycin 0.025 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,627,540 | - | Shewana3_3020 | 0.89 | +1.0 | |
3,627,813 | - | Shewana3_3021 | 0.13 | -0.8 | |
3,628,073 | - | Shewana3_3021 | 0.61 | -0.3 | |
3,628,544 | - | acpS | Shewana3_3022 | 0.24 | -1.5 |
3,628,589 | - | acpS | Shewana3_3022 | 0.36 | +0.1 |
3,628,621 | - | acpS | Shewana3_3022 | 0.44 | +1.0 |
3,628,646 | + | acpS | Shewana3_3022 | 0.51 | +0.0 |
3,628,778 | - | acpS | Shewana3_3022 | 0.85 | -1.3 |
3,629,629 | - | -0.0 | |||
3,629,629 | - | -1.3 |
Or see this region's nucleotide sequence