Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2819
Experiment: Spectinomycin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Spectinomycin 0.025 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 3,367,265 | - | +0.2 | |||
| 3,367,279 | + | +0.2 | |||
| 3,367,426 | - | Shewana3_2819 | 0.12 | -1.5 | |
| 3,367,431 | + | Shewana3_2819 | 0.13 | -0.0 | |
| 3,367,439 | - | Shewana3_2819 | 0.15 | -2.1 | |
| 3,367,589 | + | Shewana3_2819 | 0.58 | +0.0 | |
| 3,367,675 | - | Shewana3_2819 | 0.82 | -0.6 | |
| 3,367,763 | - | +2.2 | |||
| 3,367,795 | - | -1.7 | |||
| 3,367,802 | - | +0.2 | |||
| 3,367,961 | - | -0.2 | |||
| 3,368,251 | - | Shewana3_2820 | 0.23 | +0.6 | |
| 3,368,357 | - | Shewana3_2820 | 0.28 | +0.2 | |
| 3,368,390 | - | Shewana3_2820 | 0.30 | -0.0 | |
| 3,368,390 | - | Shewana3_2820 | 0.30 | -0.1 | |
| 3,368,600 | - | Shewana3_2820 | 0.41 | +0.8 | |
| 3,368,621 | + | Shewana3_2820 | 0.42 | -0.4 |
Or see this region's nucleotide sequence