Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2687

Experiment: Spectinomycin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.025 mg/ml
3,213,875	+				-0.5
3,213,895	-				+2.2
3,214,005	-				-0.9
3,214,054	-				-2.1
3,214,054	-				-1.1
3,214,054	-				+0.9
3,214,065	-				-1.0
3,214,196	+				+0.2
3,214,228	+				-0.6
3,214,229	-				+0.8
3,214,229	-				-1.3
3,214,363	-				+0.1
3,214,461	+		Shewana3_2687	0.12	+0.2
3,214,469	-		Shewana3_2687	0.13	+0.2
3,214,487	+		Shewana3_2687	0.15	-0.8
3,214,487	-		Shewana3_2687	0.15	-0.4
3,214,492	-		Shewana3_2687	0.15	-0.3
3,214,506	-		Shewana3_2687	0.17	-1.1
3,214,506	-		Shewana3_2687	0.17	-0.2
3,214,592	-		Shewana3_2687	0.27	+0.1
3,214,646	+		Shewana3_2687	0.33	+0.2
3,214,646	+		Shewana3_2687	0.33	+0.6
3,214,646	+		Shewana3_2687	0.33	+0.6
3,214,646	+		Shewana3_2687	0.33	+1.2
3,214,646	+		Shewana3_2687	0.33	+0.6
3,214,646	+		Shewana3_2687	0.33	+1.2
3,214,646	+		Shewana3_2687	0.33	+1.2
3,214,646	+		Shewana3_2687	0.33	+0.2
3,214,646	+		Shewana3_2687	0.33	-1.5
3,214,646	+		Shewana3_2687	0.33	+2.2
3,214,649	-		Shewana3_2687	0.33	-0.2
3,214,654	-		Shewana3_2687	0.34	+0.2
3,214,654	-		Shewana3_2687	0.34	-1.1
3,214,654	-		Shewana3_2687	0.34	+2.2
3,214,654	-		Shewana3_2687	0.34	-0.4
3,214,654	-		Shewana3_2687	0.34	-1.3
3,214,654	-		Shewana3_2687	0.34	-1.1
3,214,654	-		Shewana3_2687	0.34	-0.8
3,214,654	-		Shewana3_2687	0.34	-2.6
3,214,654	-		Shewana3_2687	0.34	+1.2
3,214,654	-		Shewana3_2687	0.34	+1.6
3,214,654	-		Shewana3_2687	0.34	+1.2
3,214,654	-		Shewana3_2687	0.34	-0.6
3,214,654	-		Shewana3_2687	0.34	-1.9
3,214,654	-		Shewana3_2687	0.34	-1.9
3,214,654	-		Shewana3_2687	0.34	+0.5
3,214,654	-		Shewana3_2687	0.34	-0.4
3,214,654	-		Shewana3_2687	0.34	+0.0
3,214,654	-		Shewana3_2687	0.34	+1.2
3,214,654	-		Shewana3_2687	0.34	+2.2
3,214,654	-		Shewana3_2687	0.34	-1.5
3,214,659	-		Shewana3_2687	0.34	-0.1
3,214,782	+		Shewana3_2687	0.48	+2.2
3,214,792	+		Shewana3_2687	0.49	+1.2
3,214,800	-		Shewana3_2687	0.50	+0.6
3,214,800	-		Shewana3_2687	0.50	-0.7
3,214,916	-		Shewana3_2687	0.63	+1.1
3,214,923	-		Shewana3_2687	0.64	-0.4
3,214,931	-		Shewana3_2687	0.64	+0.3
3,215,018	-		Shewana3_2687	0.74	-0.3
3,215,030	-		Shewana3_2687	0.75	+1.2
3,215,095	+		Shewana3_2687	0.83	+0.4
3,215,098	-		Shewana3_2687	0.83	-0.4
3,215,103	-				+2.2
3,215,103	-		Shewana3_2687	0.84	+1.2
3,215,105	+		Shewana3_2687	0.84	+2.2
3,215,105	+		Shewana3_2687	0.84	+1.2
3,215,108	-		Shewana3_2687	0.84	-3.1
3,215,113	-		Shewana3_2687	0.85	-0.6
3,215,163	+				+2.2
3,215,163	+				-0.9
3,215,194	-				-2.0
3,215,202	+				-0.1
3,215,202	+				+2.2
3,215,202	+				+2.2
3,215,202	+				+0.6
3,215,202	+				+0.6
3,215,203	+				-0.8
3,215,203	+				-1.5
3,215,210	-				+1.2
3,215,210	-				-2.5
3,215,210	-				-0.9
3,215,210	-				-1.1
3,215,210	-				-1.1
3,215,210	-				-0.1
3,215,218	+				+0.2
3,215,257	-				-0.7
3,215,259	-				-0.4
3,215,284	-				-0.8
3,215,289	-				-1.0
3,215,344	+				+1.2
3,215,347	-				+0.7
3,215,352	-				-0.5
3,215,352	-				+0.4
3,215,371	+				-1.6
3,215,430	-				-1.2
3,215,466	-				+0.8
3,215,490	+				-0.9
3,215,515	-				+1.2
3,215,515	-				-1.6
3,215,615	-				-0.6
3,215,874	+				+0.6
3,215,882	-				-1.2
3,215,882	-				-0.0
3,215,977	-				-0.7
3,216,096	+		Shewana3_2688	0.14	-0.6
3,216,143	+		Shewana3_2688	0.24	+0.2