Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2610
Experiment: Spectinomycin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Spectinomycin 0.025 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,113,371 | + | Shewana3_2609 | 0.38 | +0.9 | |
3,113,583 | + | Shewana3_2609 | 0.84 | +0.1 | |
3,113,760 | - | +0.7 | |||
3,113,840 | - | +2.2 | |||
3,113,911 | - | -0.1 | |||
3,113,921 | + | -0.6 | |||
3,113,931 | - | +1.2 | |||
3,114,501 | - | Shewana3_2610 | 0.38 | +0.2 | |
3,115,490 | - | +0.2 | |||
3,115,726 | - | -1.2 | |||
3,115,815 | + | +0.2 | |||
3,115,815 | + | +1.2 | |||
3,115,887 | + | Shewana3_2611 | 0.10 | -2.5 | |
3,116,218 | + | Shewana3_2611 | 0.21 | +0.2 | |
3,116,218 | + | Shewana3_2611 | 0.21 | +0.9 | |
3,116,226 | - | Shewana3_2611 | 0.21 | +1.2 | |
3,116,291 | + | Shewana3_2611 | 0.24 | +0.4 |
Or see this region's nucleotide sequence