Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2422
Experiment: Spectinomycin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Spectinomycin 0.025 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,904,468 | - | Shewana3_2421 | 0.40 | -1.5 | |
2,904,542 | + | Shewana3_2421 | 0.52 | -2.5 | |
2,904,608 | - | Shewana3_2421 | 0.63 | -1.7 | |
2,904,722 | - | Shewana3_2421 | 0.82 | +0.1 | |
2,904,797 | + | -2.2 | |||
2,904,868 | - | +0.7 | |||
2,904,876 | - | +2.3 | |||
2,904,968 | + | -0.1 | |||
2,905,036 | + | +0.7 | |||
2,905,152 | + | Shewana3_2422 | 0.33 | -2.9 | |
2,905,185 | - | Shewana3_2422 | 0.45 | +0.7 | |
2,905,272 | + | Shewana3_2422 | 0.79 | +0.4 | |
2,905,641 | + | Shewana3_2423 | 0.25 | -0.4 | |
2,905,660 | + | Shewana3_2423 | 0.27 | +0.7 | |
2,905,915 | - | Shewana3_2423 | 0.55 | +0.7 | |
2,906,004 | - | Shewana3_2423 | 0.65 | +0.4 | |
2,906,230 | - | Shewana3_2423 | 0.89 | +0.6 |
Or see this region's nucleotide sequence