Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2391
Experiment: Spectinomycin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Spectinomycin 0.025 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,868,804 | + | Shewana3_2389 | 0.27 | -0.7 | |
2,868,872 | + | Shewana3_2389 | 0.36 | -0.3 | |
2,868,919 | + | Shewana3_2389 | 0.43 | -1.0 | |
2,868,927 | - | Shewana3_2389 | 0.44 | +0.7 | |
2,869,063 | + | Shewana3_2389 | 0.63 | +1.4 | |
2,869,149 | + | Shewana3_2389 | 0.75 | +1.3 | |
2,869,400 | + | Shewana3_2390 | 0.27 | +0.1 | |
2,869,472 | + | Shewana3_2390 | 0.50 | -1.1 | |
2,869,653 | - | -0.0 | |||
2,870,536 | - | +2.6 | |||
2,870,541 | - | -1.4 | |||
2,870,662 | + | +0.3 | |||
2,871,133 | + | Shewana3_2392 | 0.28 | +0.6 | |
2,871,171 | - | Shewana3_2392 | 0.32 | +2.3 | |
2,871,251 | + | Shewana3_2392 | 0.40 | -0.1 | |
2,871,276 | - | Shewana3_2392 | 0.42 | -0.7 | |
2,871,350 | - | Shewana3_2392 | 0.50 | +1.0 | |
2,871,395 | - | Shewana3_2392 | 0.54 | -0.1 | |
2,871,395 | - | Shewana3_2392 | 0.54 | -1.6 |
Or see this region's nucleotide sequence