Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2315
Experiment: Spectinomycin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Spectinomycin 0.025 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,786,902 | + | Shewana3_2314 | 0.61 | +0.4 | |
| 2,787,073 | - | Shewana3_2314 | 0.69 | -0.8 | |
| 2,787,780 | + | +0.8 | |||
| 2,787,969 | - | Shewana3_2315 | 0.26 | +0.0 | |
| 2,787,999 | - | Shewana3_2315 | 0.33 | -1.3 | |
| 2,788,224 | + | Shewana3_2315 | 0.85 | +0.4 | |
| 2,788,372 | + | +0.8 | |||
| 2,788,372 | + | +1.4 | |||
| 2,788,380 | - | +0.6 | |||
| 2,788,442 | + | Shewana3_2316 | 0.28 | +2.4 |
Or see this region's nucleotide sequence