Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2133
Experiment: Spectinomycin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Spectinomycin 0.025 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,558,169 | + | Shewana3_2132 | 0.33 | +0.9 | |
2,558,177 | - | Shewana3_2132 | 0.34 | -1.3 | |
2,558,213 | - | Shewana3_2132 | 0.38 | +0.8 | |
2,558,318 | - | Shewana3_2132 | 0.48 | +0.1 | |
2,558,472 | + | Shewana3_2132 | 0.63 | +2.4 | |
2,558,534 | + | Shewana3_2132 | 0.69 | +1.4 | |
2,558,694 | + | Shewana3_2132 | 0.84 | -0.6 | |
2,558,803 | - | +0.4 | |||
2,559,042 | + | -1.5 | |||
2,559,210 | + | Shewana3_2133 | 0.16 | +1.3 | |
2,559,506 | - | Shewana3_2133 | 0.77 | +1.5 | |
2,559,561 | + | Shewana3_2133 | 0.89 | +0.9 |
Or see this region's nucleotide sequence