Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2118
Experiment: Spectinomycin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Spectinomycin 0.025 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,541,020 | + | Shewana3_2117 | 0.32 | -1.3 | |
2,541,429 | + | Shewana3_2117 | 0.75 | +1.9 | |
2,541,749 | + | +0.9 | |||
2,541,823 | - | Shewana3_2118 | 0.14 | -0.9 | |
2,541,856 | - | Shewana3_2118 | 0.19 | +0.3 | |
2,541,876 | - | Shewana3_2118 | 0.23 | +0.9 | |
2,542,008 | + | Shewana3_2118 | 0.44 | +0.4 | |
2,542,053 | - | Shewana3_2118 | 0.51 | +1.4 | |
2,542,568 | - | Shewana3_2119 | 0.27 | -0.4 | |
2,542,601 | + | Shewana3_2119 | 0.31 | +0.9 | |
2,542,774 | + | Shewana3_2119 | 0.52 | +0.9 | |
2,542,846 | + | Shewana3_2119 | 0.61 | +1.4 | |
2,543,124 | - | -0.1 | |||
2,543,129 | - | +2.5 | |||
2,543,285 | - | +1.5 |
Or see this region's nucleotide sequence