Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1897

Experiment: Spectinomycin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.025 mg/ml
2,249,508	+		Shewana3_1895	0.88	-0.6
2,249,561	+				+1.3
2,249,561	+				+1.0
2,249,621	-				-0.5
2,249,683	-				+0.8
2,249,701	-				+0.2
2,249,813	+				+1.9
2,249,947	-		Shewana3_1896	0.17	+2.4
2,249,952	-		Shewana3_1896	0.18	+0.1
2,250,171	+		Shewana3_1896	0.71	-0.6
2,250,223	+		Shewana3_1896	0.83	-0.1
2,250,301	+				-0.2
2,250,606	-				+0.2
2,250,881	+		Shewana3_1897	0.12	+0.8
2,250,912	-		Shewana3_1897	0.13	+1.4
2,251,019	+		Shewana3_1897	0.15	+0.2
2,251,100	+		Shewana3_1897	0.17	+0.0
2,251,173	+		Shewana3_1897	0.19	+0.6
2,251,299	-		Shewana3_1897	0.23	+0.8
2,251,321	+		Shewana3_1897	0.23	-1.6
2,251,517	-		Shewana3_1897	0.28	-0.8
2,251,843	-		Shewana3_1897	0.37	+0.4
2,251,942	-		Shewana3_1897	0.39	+2.4
2,252,032	+		Shewana3_1897	0.41	-1.3
2,252,087	+		Shewana3_1897	0.43	+0.4
2,252,269	+		Shewana3_1897	0.48	-0.8
2,252,269	+		Shewana3_1897	0.48	-1.4
2,252,294	-		Shewana3_1897	0.48	-1.4
2,252,367	+		Shewana3_1897	0.50	+0.1
2,252,440	-		Shewana3_1897	0.52	+0.8
2,252,539	+		Shewana3_1897	0.55	+1.7
2,252,547	-		Shewana3_1897	0.55	+0.8
2,253,488	+		Shewana3_1897	0.79	-0.1
2,253,488	+		Shewana3_1897	0.79	+0.2
2,253,498	+		Shewana3_1897	0.79	+1.0
2,253,506	-		Shewana3_1897	0.79	-0.2
2,253,506	-		Shewana3_1897	0.79	+1.4
2,253,610	+		Shewana3_1897	0.82	+0.2
2,253,618	-		Shewana3_1897	0.82	+0.4
2,253,680	+		Shewana3_1897	0.84	+0.4
2,253,712	+		Shewana3_1897	0.85	+1.4
2,253,819	+		Shewana3_1897	0.88	+0.1
2,254,040	+				+1.0
2,254,258	-				+0.4
2,254,594	+				+0.8
2,254,663	-				-0.6
2,254,901	+				+1.8
2,254,901	+				+1.3
2,254,964	+				+0.4
2,255,067	-		Shewana3_1898	0.38	+1.4
2,255,081	+		Shewana3_1898	0.47	+1.9
2,255,081	+		Shewana3_1898	0.47	+0.9