Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1819

Experiment: Spectinomycin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.025 mg/ml
2,146,890	-		Shewana3_1818	0.75	+1.4
2,146,951	+		Shewana3_1818	0.77	+1.3
2,146,951	+		Shewana3_1818	0.77	-0.8
2,147,642	+				+0.5
2,147,852	+				-0.2
2,147,892	+				+0.1
2,147,936	+				+1.2
2,147,937	-				-1.2
2,147,970	-				-0.6
2,148,036	+				-1.1
2,148,203	-				+0.1
2,148,212	+				+0.6
2,148,333	-		Shewana3_1819	0.13	-1.8
2,148,371	+		Shewana3_1819	0.14	+2.4
2,148,414	-		Shewana3_1819	0.15	-1.6
2,148,562	-		Shewana3_1819	0.20	-0.6
2,148,606	+		Shewana3_1819	0.21	-1.1
2,148,751	-		Shewana3_1819	0.25	-0.8
2,148,822	-		Shewana3_1819	0.27	+2.4
2,148,851	-		Shewana3_1819	0.28	+0.8
2,149,038	+		Shewana3_1819	0.33	-0.9
2,149,204	+		Shewana3_1819	0.38	-0.9
2,149,428	-		Shewana3_1819	0.45	-0.8
2,149,606	+		Shewana3_1819	0.50	-0.5
2,149,675	-		Shewana3_1819	0.52	-0.1
2,149,847	+		Shewana3_1819	0.57	+0.2
2,149,912	-		Shewana3_1819	0.59	+0.8
2,149,912	-		Shewana3_1819	0.59	+2.4
2,150,117	-		Shewana3_1819	0.65	+2.4
2,150,157	+		Shewana3_1819	0.66	-0.2
2,150,222	+		Shewana3_1819	0.68	-1.3
2,150,404	-		Shewana3_1819	0.73	+0.1
2,150,501	+		Shewana3_1819	0.76	+0.8
2,150,777	-		Shewana3_1819	0.84	-0.1
2,150,872	+		Shewana3_1819	0.86	-0.2
2,151,029	-				+0.4
2,151,220	+				-0.2
2,151,304	-				-0.2
2,151,304	-				-1.9
2,151,304	-				-1.8
2,151,391	-				-0.3
2,151,529	+		Shewana3_1820	0.11	+0.3
2,151,726	-		Shewana3_1820	0.22	+1.4
2,151,962	+		Shewana3_1820	0.36	+1.3
2,152,026	-		Shewana3_1820	0.40	+0.1
2,152,034	+		Shewana3_1820	0.41	+1.4
2,152,096	+		Shewana3_1820	0.44	-0.6
2,152,103	+		Shewana3_1820	0.45	+0.8
2,152,219	+		Shewana3_1820	0.52	+0.8
2,152,228	+		Shewana3_1820	0.52	+0.4
2,152,236	-		Shewana3_1820	0.53	+2.4
2,152,236	-		Shewana3_1820	0.53	+2.4