Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1302

Experiment: Spectinomycin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.025 mg/ml
1,515,871	-		Shewana3_1301	0.74	+1.9
1,515,898	-		Shewana3_1301	0.75	+0.3
1,515,898	-		Shewana3_1301	0.75	+0.9
1,515,901	+		Shewana3_1301	0.75	-1.2
1,515,927	-		Shewana3_1301	0.76	+0.5
1,515,964	-		Shewana3_1301	0.78	-0.7
1,516,052	+		Shewana3_1301	0.81	-0.7
1,516,058	-		Shewana3_1301	0.82	-0.7
1,516,060	+		Shewana3_1301	0.82	-0.5
1,516,060	+		Shewana3_1301	0.82	-0.5
1,516,060	+		Shewana3_1301	0.82	-0.3
1,516,060	+		Shewana3_1301	0.82	+1.1
1,516,060	+		Shewana3_1301	0.82	-0.1
1,516,068	-		Shewana3_1301	0.82	+0.3
1,516,068	-		Shewana3_1301	0.82	-0.7
1,516,068	-		Shewana3_1301	0.82	+0.4
1,516,068	-		Shewana3_1301	0.82	+0.1
1,516,068	-		Shewana3_1301	0.82	-2.0
1,516,068	-		Shewana3_1301	0.82	-1.4
1,516,082	-		Shewana3_1301	0.82	-1.1
1,516,106	-		Shewana3_1301	0.83	-0.9
1,516,115	+				+0.9
1,516,120	+		Shewana3_1301	0.84	+0.6
1,516,123	-		Shewana3_1301	0.84	-0.7
1,516,125	+		Shewana3_1301	0.84	-1.5
1,516,125	+				+1.9
1,516,133	-		Shewana3_1301	0.85	-1.1
1,516,133	-		Shewana3_1301	0.85	+1.6
1,516,295	-				-1.1
1,516,312	+				+0.3
1,516,313	+				-1.3
1,516,313	+				+1.5
1,516,331	+				-0.5
1,516,331	+				-1.7
1,516,332	+				-0.7
1,516,333	+				-2.7
1,516,333	+				+1.9
1,516,333	+				+1.5
1,516,339	-				-2.0
1,516,339	-				+0.3
1,516,341	-				+0.9
1,516,399	+				+0.2
1,516,409	-				-1.5
1,516,434	+				-0.2
1,516,440	+				-1.3
1,516,447	-				-0.8
1,516,452	-				+0.3
1,516,455	+				-0.8
1,516,455	+				+0.4
1,516,463	+				-1.5
1,516,537	+				+0.2
1,516,549	+				+0.5
1,516,557	-				-1.4
1,516,557	-				-1.6
1,516,557	-				-0.1
1,516,559	+				+0.1
1,516,560	+				-0.7
1,516,591	-				-1.6
1,516,602	-				+0.1
1,516,603	-				-1.8
1,516,603	-				-0.1
1,516,673	+				-1.0
1,516,712	+				-0.7
1,516,788	-				-1.2
1,516,860	-				-0.1
1,517,007	+		Shewana3_1302	0.14	+0.2
1,517,018	-		Shewana3_1302	0.15	-0.5
1,517,028	-		Shewana3_1302	0.16	-0.9
1,517,113	+		Shewana3_1302	0.25	+0.4
1,517,204	+		Shewana3_1302	0.34	-0.5
1,517,345	+		Shewana3_1302	0.48	-1.1
1,517,364	+		Shewana3_1302	0.50	+0.4
1,517,389	-		Shewana3_1302	0.53	-0.1
1,517,465	+		Shewana3_1302	0.60	-0.1
1,517,471	+		Shewana3_1302	0.61	+0.3
1,517,471	+		Shewana3_1302	0.61	-1.0
1,517,479	-		Shewana3_1302	0.62	-1.1
1,517,646	+		Shewana3_1302	0.79	+0.4
1,517,648	+		Shewana3_1302	0.79	+1.5
1,518,011	-		Shewana3_1303	0.14	+0.9
1,518,024	+		Shewana3_1303	0.15	-2.5
1,518,024	+		Shewana3_1303	0.15	+0.2
1,518,119	+		Shewana3_1303	0.23	-3.0
1,518,127	-		Shewana3_1303	0.24	-0.7
1,518,606	+		Shewana3_1303	0.66	-0.9
1,518,688	+		Shewana3_1303	0.73	-0.5
1,518,803	-		Shewana3_1303	0.83	+0.3