Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1254

Experiment: Spectinomycin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.025 mg/ml
1,467,516	+		Shewana3_1253	0.50	-0.6
1,467,677	+		Shewana3_1253	0.70	-0.4
1,467,708	-		Shewana3_1253	0.74	-1.8
1,467,724	+		Shewana3_1253	0.76	-0.5
1,467,765	-		Shewana3_1253	0.81	-1.0
1,467,829	+		Shewana3_1253	0.89	+0.2
1,467,838	+				-0.1
1,468,011	+				-0.7
1,468,327	-				+0.7
1,468,380	+				-0.2
1,468,428	+		Shewana3_1254	0.11	+0.5
1,468,433	-		Shewana3_1254	0.11	-0.7
1,468,555	+		Shewana3_1254	0.15	-1.3
1,468,581	-		Shewana3_1254	0.16	-1.0
1,468,583	+		Shewana3_1254	0.16	-0.8
1,468,678	+		Shewana3_1254	0.19	-0.8
1,468,742	+		Shewana3_1254	0.21	-0.5
1,468,742	-		Shewana3_1254	0.21	-0.3
1,468,758	+		Shewana3_1254	0.21	+1.1
1,468,886	-		Shewana3_1254	0.25	+0.6
1,469,000	-		Shewana3_1254	0.28	-0.1
1,469,101	-		Shewana3_1254	0.31	-1.9
1,469,431	-		Shewana3_1254	0.42	+0.2
1,469,541	-		Shewana3_1254	0.45	+0.6
1,469,612	+		Shewana3_1254	0.47	+0.1
1,469,735	+		Shewana3_1254	0.51	-0.6
1,469,740	+		Shewana3_1254	0.51	+0.1
1,469,748	-		Shewana3_1254	0.51	-1.5
1,469,797	+		Shewana3_1254	0.53	-1.3
1,469,832	+		Shewana3_1254	0.54	-0.0
1,469,832	+		Shewana3_1254	0.54	-0.3
1,470,083	-		Shewana3_1254	0.61	-1.1
1,470,254	+		Shewana3_1254	0.67	+1.0
1,470,292	-		Shewana3_1254	0.68	-1.1
1,470,358	-		Shewana3_1254	0.70	-0.4
1,470,462	-		Shewana3_1254	0.73	-1.6
1,470,880	-		Shewana3_1254	0.86	-1.6
1,471,059	-				-0.8
1,471,079	-				+0.1
1,471,098	+				+0.8
1,471,101	-				+0.5
1,471,106	-				-1.6
1,471,135	-				+0.7
1,471,450	-				+1.0
1,471,490	+				+1.5
1,471,662	+		Shewana3_1255	0.13	-1.0
1,471,859	+		Shewana3_1255	0.25	+0.0
1,471,923	-		Shewana3_1255	0.28	+0.9
1,471,929	-		Shewana3_1255	0.29	+0.0
1,471,937	-		Shewana3_1255	0.29	-0.6