Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1135

Experiment: Spectinomycin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.025 mg/ml
1,339,031	+				+0.3
1,339,039	-				+1.2
1,339,228	-				-0.4
1,339,320	+		Shewana3_1134	0.11	+0.5
1,339,336	+		Shewana3_1134	0.14	+0.3
1,339,435	-		Shewana3_1134	0.28	+0.4
1,339,640	-		Shewana3_1134	0.58	-0.2
1,339,719	-		Shewana3_1134	0.69	-1.8
1,339,778	+		Shewana3_1134	0.78	+0.7
1,339,778	+		Shewana3_1134	0.78	+0.7
1,339,917	-				-1.0
1,339,943	-				-0.4
1,340,022	-				+1.0
1,340,041	-				+1.6
1,340,186	+		Shewana3_1135	0.42	-0.6
1,340,186	+		Shewana3_1135	0.42	+1.9
1,340,318	+		Shewana3_1135	0.71	-0.7
1,340,397	+		Shewana3_1135	0.89	+1.9
1,340,541	-				+0.3
1,340,560	-				+0.0
1,340,688	+		Shewana3_1136	0.19	-0.8
1,340,754	+		Shewana3_1136	0.43	-0.6
1,340,845	-		Shewana3_1136	0.76	-0.1
1,340,933	-				-0.8
1,340,940	+				-0.4
1,340,985	-		Shewana3_1137	0.11	-1.6
1,341,106	-		Shewana3_1137	0.43	-0.7
1,341,154	+		Shewana3_1137	0.56	-0.0
1,341,202	+		Shewana3_1137	0.69	+0.4
1,341,250	+		Shewana3_1137	0.81	-1.3
1,341,266	+		Shewana3_1137	0.86	+1.3