Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1077

Experiment: Spectinomycin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.025 mg/ml
1,261,567	-		Shewana3_1076	0.17	+1.8
1,261,652	-		Shewana3_1076	0.30	+1.9
1,261,796	-		Shewana3_1076	0.54	+1.8
1,261,949	-		Shewana3_1076	0.78	+1.7
1,261,959	-		Shewana3_1076	0.80	+1.9
1,261,999	-		Shewana3_1076	0.86	+2.3
1,262,455	-				+0.5
1,262,512	+				+0.6
1,262,556	+				-0.4
1,262,561	+				+0.1
1,262,579	-		Shewana3_1077	0.11	-0.3
1,262,713	+		Shewana3_1077	0.22	+0.9
1,262,757	-		Shewana3_1077	0.25	-0.7
1,262,784	+		Shewana3_1077	0.28	+0.9
1,262,789	+		Shewana3_1077	0.28	-0.2
1,262,822	-		Shewana3_1077	0.31	+0.0
1,263,040	+		Shewana3_1077	0.48	+1.3
1,263,040	+		Shewana3_1077	0.48	+0.3
1,263,040	+		Shewana3_1077	0.48	-0.9
1,263,048	-		Shewana3_1077	0.49	+0.1
1,263,048	-		Shewana3_1077	0.49	-0.4
1,263,048	-		Shewana3_1077	0.49	-0.7
1,263,058	-		Shewana3_1077	0.50	-2.4
1,263,173	+		Shewana3_1077	0.59	-0.3
1,263,190	-		Shewana3_1077	0.60	-2.0
1,263,197	+		Shewana3_1077	0.61	-0.7
1,263,294	-		Shewana3_1077	0.69	-0.4
1,263,385	+		Shewana3_1077	0.76	-2.5
1,263,407	-		Shewana3_1077	0.78	-1.4
1,263,420	+		Shewana3_1077	0.79	-0.3
1,263,430	+		Shewana3_1077	0.80	+1.5
1,263,533	+		Shewana3_1077	0.88	-0.6
1,263,591	+				-0.1
1,263,598	-				+0.6
1,263,665	-				-0.3
1,263,780	+				+1.2
1,263,843	+				+0.0
1,263,962	+				+1.0
1,263,970	-				-0.3
1,263,970	-				-1.8
1,263,992	+				+0.3
1,263,992	+				+0.3
1,264,061	+		Shewana3_1078	0.12	-0.6
1,264,317	+		Shewana3_1078	0.20	-0.0
1,264,361	-				-0.4
1,264,366	+		Shewana3_1078	0.21	-1.0
1,264,447	+		Shewana3_1078	0.24	-0.6
1,264,518	+		Shewana3_1078	0.26	+1.6