Strain Fitness in Shewanella sp. ANA-3 around Shewana3_0471
Experiment: Spectinomycin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Spectinomycin 0.025 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 547,888 | - | -0.7 | |||
| 547,927 | + | -1.6 | |||
| 548,042 | - | Shewana3_0471 | 0.16 | +0.2 | |
| 548,069 | + | Shewana3_0471 | 0.23 | +0.3 | |
| 548,091 | - | Shewana3_0471 | 0.28 | -1.6 | |
| 548,128 | + | Shewana3_0471 | 0.36 | -0.2 | |
| 548,143 | - | Shewana3_0471 | 0.40 | -0.2 | |
| 548,206 | + | Shewana3_0471 | 0.55 | -2.2 | |
| 548,214 | + | Shewana3_0471 | 0.57 | -0.7 | |
| 548,214 | - | Shewana3_0471 | 0.57 | +0.2 | |
| 548,216 | + | Shewana3_0471 | 0.57 | -0.4 | |
| 548,224 | - | Shewana3_0471 | 0.59 | +0.3 | |
| 548,263 | - | Shewana3_0471 | 0.68 | +0.3 | |
| 548,307 | + | Shewana3_0471 | 0.78 | -0.7 | |
| 548,307 | + | Shewana3_0471 | 0.78 | -0.4 | |
| 548,307 | + | Shewana3_0471 | 0.78 | -1.4 | |
| 548,307 | + | Shewana3_0471 | 0.78 | -1.3 | |
| 548,307 | + | Shewana3_0471 | 0.78 | -0.3 | |
| 548,307 | + | Shewana3_0471 | 0.78 | -0.6 | |
| 548,356 | + | -0.0 | |||
| 548,364 | - | +1.1 |
Or see this region's nucleotide sequence