Strain Fitness in Shewanella sp. ANA-3 around Shewana3_0106

Experiment: Spectinomycin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.025 mg/ml
120,209	+				-0.1
120,216	+				-0.0
120,218	+				+0.4
120,224	-				-1.2
120,312	-		Shewana3_0105	0.17	-0.7
120,391	-		Shewana3_0105	0.26	-0.5
120,447	-		Shewana3_0105	0.32	-0.2
120,546	+		Shewana3_0105	0.43	+1.3
120,546	+		Shewana3_0105	0.43	+0.7
120,656	-		Shewana3_0105	0.55	+0.1
120,674	+		Shewana3_0105	0.57	+0.4
120,682	-		Shewana3_0105	0.58	-1.6
120,756	+		Shewana3_0105	0.66	+0.4
120,813	+		Shewana3_0105	0.72	+1.0
120,841	-		Shewana3_0105	0.75	+0.2
121,019	+				+0.0
121,078	+				-0.9
121,079	+				-1.1
121,152	+				-1.0
121,152	+				+0.2
121,152	+				+0.0
121,178	+				+0.9
121,281	-		Shewana3_0106	0.12	-0.1
121,379	+		Shewana3_0106	0.19	+0.0
121,387	-		Shewana3_0106	0.19	-0.0
121,395	+		Shewana3_0106	0.20	+1.0
121,410	+		Shewana3_0106	0.21	-0.8
121,442	+		Shewana3_0106	0.23	+0.1
121,476	-		Shewana3_0106	0.25	+0.7
121,476	-		Shewana3_0106	0.25	-0.1
121,476	-		Shewana3_0106	0.25	-0.5
121,572	+		Shewana3_0106	0.32	-0.6
121,815	+		Shewana3_0106	0.49	+0.1
121,873	-		Shewana3_0106	0.53	-1.5
121,873	-		Shewana3_0106	0.53	+0.4
121,892	+		Shewana3_0106	0.54	+0.7
121,926	+		Shewana3_0106	0.57	+0.9
121,948	+		Shewana3_0106	0.58	+0.2
121,974	+		Shewana3_0106	0.60	+0.2
121,991	-		Shewana3_0106	0.61	+1.7
122,020	-		Shewana3_0106	0.63	-0.8
122,093	-		Shewana3_0106	0.68	-0.9
122,263	+		Shewana3_0106	0.80	+0.7
122,263	+		Shewana3_0106	0.80	+0.4
122,263	+		Shewana3_0106	0.80	-0.3
122,271	-		Shewana3_0106	0.81	+0.3
122,307	-		Shewana3_0106	0.83	+1.1
122,439	+				+0.2
122,447	-				-1.0
122,447	-				+0.1
122,524	-				-0.1
122,630	+				+0.7
122,711	-				+0.5
122,788	-		Shewana3_0107	0.12	-0.3
122,788	-		Shewana3_0107	0.12	+0.3
122,814	+		Shewana3_0107	0.14	+0.1
123,020	-		Shewana3_0107	0.24	+0.3
123,075	+		Shewana3_0107	0.26	-0.1
123,083	-		Shewana3_0107	0.27	+0.1
123,083	-		Shewana3_0107	0.27	-0.7
123,113	+		Shewana3_0107	0.28	+0.4
123,128	+		Shewana3_0107	0.29	+0.4
123,165	+		Shewana3_0107	0.31	-0.7
123,183	-		Shewana3_0107	0.32	-0.0
123,235	+		Shewana3_0107	0.34	+0.4
123,246	-		Shewana3_0107	0.35	+0.0
123,253	-		Shewana3_0107	0.35	-0.1
123,370	-		Shewana3_0107	0.41	-0.1
123,391	-		Shewana3_0107	0.42	-0.0
123,482	-		Shewana3_0107	0.47	-0.3