Strain Fitness in Shewanella sp. ANA-3 around Shewana3_0102

Experiment: Spectinomycin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.025 mg/ml
114,784	+		Shewana3_0101	0.87	+0.1
114,798	-		Shewana3_0101	0.88	+1.1
114,837	+				+0.3
114,845	-				+0.0
114,921	+				+0.2
114,921	+				+0.7
114,921	+				-0.1
114,924	-				+0.2
114,936	+				+0.5
114,975	+				+0.3
114,981	-				+0.2
114,993	-				-0.3
115,043	+				+1.0
115,126	+				-0.1
115,126	+				-0.9
115,126	+				+0.2
115,134	-				+0.2
115,499	+				+1.2
115,572	+				+0.4
115,698	-				+0.6
115,755	-				-1.0
116,136	-		Shewana3_0102	0.18	-1.1
116,256	+		Shewana3_0102	0.22	+0.5
116,524	+		Shewana3_0102	0.31	-0.7
116,666	-		Shewana3_0102	0.36	+0.7
116,748	-		Shewana3_0102	0.39	+0.1
116,801	-		Shewana3_0102	0.40	-0.8
116,802	-		Shewana3_0102	0.40	-0.2
116,825	+		Shewana3_0102	0.41	-0.2
116,825	+		Shewana3_0102	0.41	-0.1
116,833	-		Shewana3_0102	0.41	+0.2
116,881	+		Shewana3_0102	0.43	+1.5
116,891	+		Shewana3_0102	0.43	-0.2
116,939	-		Shewana3_0102	0.45	-0.3
116,996	-		Shewana3_0102	0.47	-0.4
117,011	-		Shewana3_0102	0.47	+1.0
117,037	+		Shewana3_0102	0.48	+0.2
117,037	+		Shewana3_0102	0.48	-1.0
117,104	+		Shewana3_0102	0.50	-0.2
117,112	-		Shewana3_0102	0.51	+0.1
117,247	+		Shewana3_0102	0.55	-0.3
117,248	-		Shewana3_0102	0.55	-0.2
117,255	-		Shewana3_0102	0.55	-1.9
117,304	+		Shewana3_0102	0.57	+0.2
117,312	-		Shewana3_0102	0.57	-2.1
117,441	+		Shewana3_0102	0.61	+0.8
117,571	+		Shewana3_0102	0.66	+0.5
117,788	-		Shewana3_0102	0.73	+0.1
117,911	+		Shewana3_0102	0.77	+1.0
117,919	-		Shewana3_0102	0.77	+0.2
117,934	-		Shewana3_0102	0.78	-0.5
117,934	-		Shewana3_0102	0.78	+0.4
117,964	+		Shewana3_0102	0.79	+0.4
117,964	+		Shewana3_0102	0.79	+0.4
117,964	+		Shewana3_0102	0.79	+0.1
117,972	-		Shewana3_0102	0.79	-0.3
117,972	-		Shewana3_0102	0.79	-1.0
118,091	+		Shewana3_0102	0.83	+0.4
118,153	+		Shewana3_0102	0.85	+0.6
118,153	+		Shewana3_0102	0.85	+1.4
118,153	+		Shewana3_0102	0.85	+0.3
118,301	-				-1.0
118,499	+				+0.3
118,500	+				+1.3
118,508	-				-0.9
118,508	-				+0.2
118,620	+				+0.6
118,630	+				+0.6
118,663	+				+0.2
118,671	-				-0.3
118,908	+		Shewana3_0103	0.33	+0.3
118,923	+		Shewana3_0103	0.35	+0.5
119,069	+		Shewana3_0103	0.51	+0.4
119,074	+		Shewana3_0103	0.51	+0.7
119,139	-		Shewana3_0103	0.58	-0.2
119,154	+		Shewana3_0103	0.60	-0.2
119,289	+		Shewana3_0103	0.75	+0.7
119,297	-		Shewana3_0103	0.76	-0.5
119,299	+		Shewana3_0103	0.76	+0.5
119,301	-		Shewana3_0103	0.76	-0.3
119,355	+		Shewana3_0103	0.82	+0.5
119,367	-		Shewana3_0103	0.83	-0.4
119,410	+		Shewana3_0103	0.88	+0.3
119,490	-				-0.2