Strain Fitness in Shewanella loihica PV-4 around Shew_3752

Experiment: Ceftazidime 5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 5 mg/ml
4,467,809	-				+0.0
4,467,949	+		Shew_3751	0.12	-0.4
4,468,006	-		Shew_3751	0.21	+0.3
4,468,011	-		Shew_3751	0.22	+0.2
4,468,083	+		Shew_3751	0.34	-0.2
4,468,183	+		Shew_3751	0.50	-0.0
4,468,191	-		Shew_3751	0.51	+0.6
4,468,352	+		Shew_3751	0.77	+0.1
4,468,505	-				+0.1
4,468,505	-				+0.0
4,468,505	-				-2.9
4,468,523	+				-0.6
4,468,706	+		Shew_3752	0.17	-0.1
4,468,706	+		Shew_3752	0.17	-0.6
4,468,706	+		Shew_3752	0.17	-1.0
4,468,714	-		Shew_3752	0.18	-0.8
4,468,715	-		Shew_3752	0.18	-0.8
4,468,887	+		Shew_3752	0.32	-1.1
4,469,089	+		Shew_3752	0.48	-0.0
4,469,161	+		Shew_3752	0.53	-0.1
4,469,169	-		Shew_3752	0.54	-0.5
4,469,169	-		Shew_3752	0.54	-0.3
4,469,292	+		Shew_3752	0.64	-0.2
4,469,377	+		Shew_3752	0.71	-1.3
4,469,596	-		Shew_3752	0.88	-0.5
4,469,853	+				+0.3
4,470,073	-		Shew_3753	0.28	+0.1
4,470,265	-		Shew_3753	0.65	+0.1
4,470,714	+		Shew_3754	0.25	+0.1
4,470,736	-		Shew_3754	0.28	-0.1