Strain Fitness in Shewanella loihica PV-4 around Shew_3331

Experiment: Ceftazidime 5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 5 mg/ml
3,975,105	-		Shew_3330	0.35	+1.0
3,975,213	+		Shew_3330	0.44	-0.8
3,975,454	-		Shew_3330	0.64	-0.2
3,975,454	-		Shew_3330	0.64	-0.6
3,975,721	-		Shew_3330	0.86	-0.2
3,975,776	+				-0.6
3,975,784	-				-0.4
3,975,982	-		Shew_3331	0.14	+0.8
3,975,982	-		Shew_3331	0.14	+1.0
3,975,983	-		Shew_3331	0.14	+0.6
3,976,334	-		Shew_3331	0.59	+0.2
3,976,354	+		Shew_3331	0.62	+0.1
3,976,657	+				+0.1
3,976,971	+		Shew_3332	0.44	+0.1
3,977,059	-		Shew_3332	0.64	+0.7
3,977,129	+		Shew_3332	0.79	+2.5
3,977,250	-				+0.1
3,977,262	-				-0.4
3,977,379	-		Shew_3333	0.21	-1.9
3,977,419	-		Shew_3333	0.27	+0.3
3,977,452	+		Shew_3333	0.33	+0.3
3,977,452	+		Shew_3333	0.33	+0.4
3,977,452	+		Shew_3333	0.33	-0.2
3,977,452	+		Shew_3333	0.33	-0.0
3,977,452	+		Shew_3333	0.33	+0.5
3,977,460	-		Shew_3333	0.34	-0.2
3,977,460	-		Shew_3333	0.34	+0.5
3,977,460	-		Shew_3333	0.34	+0.2