Strain Fitness in Shewanella loihica PV-4 around Shew_3223

Experiment: Ceftazidime 5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 5 mg/ml
3,846,041	+		Shew_3222	0.43	+0.2
3,846,089	+		Shew_3222	0.51	+0.8
3,846,202	+		Shew_3222	0.70	-0.1
3,846,237	+		Shew_3222	0.75	-0.8
3,846,670	-		Shew_3223	0.14	-1.3
3,847,082	-		Shew_3223	0.69	-1.3
3,847,254	+				-0.6
3,847,275	-				-0.8
3,847,352	+				-0.1
3,847,733	+		Shew_3224	0.56	-0.4
3,847,836	+		Shew_3224	0.70	-0.1
3,847,836	+		Shew_3224	0.70	-0.5
3,847,844	-		Shew_3224	0.71	-0.8
3,847,844	-		Shew_3224	0.71	-1.0
3,847,844	-		Shew_3224	0.71	-0.8
3,847,934	+		Shew_3224	0.84	-0.3
3,847,997	-				-0.9
3,848,197	+		Shew_3225	0.11	-0.0