Strain Fitness in Shewanella loihica PV-4 around Shew_3199

Experiment: Ceftazidime 5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 5 mg/ml
3,810,604	+				+0.3
3,810,604	+				+1.1
3,810,619	-				+0.3
3,810,726	+				+0.3
3,810,740	+				-1.1
3,810,755	-				-1.5
3,810,914	-		Shew_3199	0.14	-0.1
3,811,451	-		Shew_3199	0.66	-0.2
3,811,483	+		Shew_3199	0.69	+0.1
3,811,546	-		Shew_3199	0.75	-0.2
3,811,614	-		Shew_3199	0.82	+0.4
3,811,614	-		Shew_3199	0.82	-0.6
3,811,614	-		Shew_3199	0.82	-0.8
3,811,718	-				-0.1
3,811,820	+				-0.1
3,812,032	-				+0.3
3,812,135	-				+0.2
3,812,159	+				-0.5
3,812,317	+				-0.2
3,812,508	+				-0.6
3,812,655	+		Shew_3200	0.12	+2.6
3,812,660	+		Shew_3200	0.12	+0.6
3,812,660	+		Shew_3200	0.12	-0.2