Strain Fitness in Shewanella loihica PV-4 around Shew_2870

Experiment: Ceftazidime 5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 5 mg/ml
3,407,761	-		Shew_2869	0.68	+0.7
3,408,120	+		Shew_2869	0.87	-0.5
3,408,409	+				-0.1
3,408,456	+				+0.7
3,408,602	+				-0.5
3,408,616	-				-0.4
3,408,766	+				+0.0
3,408,766	+				+0.1
3,408,870	-		Shew_2870	0.11	-0.9
3,409,325	+		Shew_2870	0.29	+0.1
3,409,333	-		Shew_2870	0.29	+1.0
3,409,628	-		Shew_2870	0.41	-0.4
3,409,720	+		Shew_2870	0.44	+0.1
3,409,728	-		Shew_2870	0.44	+0.4
3,409,996	-		Shew_2870	0.55	-0.1
3,410,168	+		Shew_2870	0.61	+0.2
3,410,243	+		Shew_2870	0.64	+0.2
3,410,326	-		Shew_2870	0.68	+0.9
3,410,378	-		Shew_2870	0.70	+0.1
3,410,605	-		Shew_2870	0.78	+0.4
3,410,709	-		Shew_2870	0.83	-0.1
3,411,223	-				+0.1
3,411,609	+				+0.2
3,411,735	+				+0.8
3,412,006	+		Shew_2871	0.16	-0.5
3,412,006	+		Shew_2871	0.16	-0.6
3,412,006	+		Shew_2871	0.16	+0.4
3,412,014	-		Shew_2871	0.17	-0.6
3,412,014	-		Shew_2871	0.17	+0.1
3,412,100	-		Shew_2871	0.25	-0.3