Strain Fitness in Shewanella loihica PV-4 around Shew_2778

Experiment: Ceftazidime 5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 5 mg/ml
3,283,739	-		Shew_2777	0.33	-0.1
3,283,764	-		Shew_2777	0.34	-0.0
3,283,788	+		Shew_2777	0.36	-0.4
3,283,788	+		Shew_2777	0.36	+0.3
3,283,788	+		Shew_2777	0.36	-0.0
3,283,796	-		Shew_2777	0.37	-0.7
3,284,049	+		Shew_2777	0.55	+0.5
3,284,049	+		Shew_2777	0.55	-0.7
3,284,290	-		Shew_2777	0.73	+0.4
3,284,494	-		Shew_2777	0.88	+0.3
3,284,731	+				+0.5
3,284,739	-				-0.6
3,284,810	-				-0.4
3,285,060	-		Shew_2778	0.11	-0.1
3,285,094	+		Shew_2778	0.12	+0.0
3,285,328	+		Shew_2778	0.19	+0.0
3,285,541	+		Shew_2778	0.26	+0.7
3,285,676	-		Shew_2778	0.31	+0.3
3,285,676	-		Shew_2778	0.31	+0.0
3,285,676	-		Shew_2778	0.31	-0.4
3,285,722	+		Shew_2778	0.32	-0.5
3,285,730	-		Shew_2778	0.33	-0.1
3,285,744	+		Shew_2778	0.33	-1.5
3,285,825	-		Shew_2778	0.36	+0.1
3,286,495	-		Shew_2778	0.58	+0.4
3,286,760	+		Shew_2778	0.67	+0.1
3,286,789	-		Shew_2778	0.68	-0.4
3,287,022	+		Shew_2778	0.75	-0.3
3,287,415	+		Shew_2778	0.88	-0.8
3,287,562	-				-0.7
3,287,916	-				+0.6
3,288,391	+		Shew_2779	0.36	+1.6