Strain Fitness in Shewanella loihica PV-4 around Shew_2563

Experiment: Ceftazidime 5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 5 mg/ml
3,020,386	-				+0.3
3,020,529	-		Shew_2562	0.37	-0.1
3,020,567	-		Shew_2562	0.45	-0.1
3,020,923	+				+0.1
3,020,995	+				-0.4
3,021,167	-				+0.5
3,021,347	+		Shew_2563	0.20	+0.1
3,021,441	+		Shew_2563	0.30	+0.7
3,021,449	-		Shew_2563	0.30	+0.5
3,021,933	-		Shew_2563	0.79	+0.0
3,021,961	-		Shew_2563	0.82	-0.1
3,022,036	+		Shew_2563	0.89	+0.8
3,022,036	+		Shew_2563	0.89	+0.1
3,022,044	-				+0.4
3,022,179	+				-0.7
3,022,303	+				-0.1
3,022,427	-		Shew_2564	0.11	+0.2
3,022,429	+		Shew_2564	0.11	-2.0
3,022,477	-		Shew_2564	0.17	+0.0
3,022,696	-		Shew_2564	0.44	+0.1
3,022,962	-		Shew_2564	0.77	+0.3