Strain Fitness in Shewanella loihica PV-4 around Shew_2337

Experiment: Ceftazidime 5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 5 mg/ml
2,730,792	-	tgt	Shew_2337	0.19	-1.3
2,731,167	-	tgt	Shew_2337	0.53	-2.9
2,731,179	+	tgt	Shew_2337	0.54	+0.9
2,731,192	+	tgt	Shew_2337	0.55	-1.6
2,731,212	-	tgt	Shew_2337	0.57	-1.0
2,731,297	-	tgt	Shew_2337	0.64	-0.2
2,731,363	-	tgt	Shew_2337	0.70	-2.7
2,731,497	+	tgt	Shew_2337	0.82	-0.8
2,731,830	+				-0.2
2,731,830	+				+0.7
2,731,838	-				+0.4
2,731,941	-				-0.5
2,732,617	-		Shew_2338	0.72	-1.1