Strain Fitness in Shewanella loihica PV-4 around Shew_2184

Experiment: Ceftazidime 5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 5 mg/ml
2,542,907	-				+0.0
2,542,920	+				+0.4
2,543,522	+				+0.4
2,543,522	+				-0.9
2,543,522	+				+0.4
2,543,522	+				+0.3
2,543,530	-				-0.1
2,543,530	-				-0.0
2,543,591	+				-0.5
2,543,597	-				+1.0
2,543,599	-				-0.6
2,543,631	+				+0.9
2,543,733	-				-0.6
2,543,943	-		Shew_2184	0.41	-0.5
2,543,943	-		Shew_2184	0.41	-2.6
2,544,294	-				-2.1
2,544,398	-				+1.2
2,544,527	+		Shew_2185	0.21	-0.5
2,544,872	-		Shew_2185	0.63	-0.6
2,544,872	-		Shew_2185	0.63	-0.6
2,545,066	+		Shew_2185	0.87	-0.9