Strain Fitness in Shewanella loihica PV-4 around Shew_2166

Experiment: Ceftazidime 5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 5 mg/ml
2,516,527	-		Shew_2165	0.42	+0.2
2,516,585	+		Shew_2165	0.48	-0.7
2,516,639	-		Shew_2165	0.55	-0.4
2,516,991	-				-0.2
2,517,452	-				-1.0
2,517,624	-		Shew_2166	0.10	-1.5
2,518,579	+		Shew_2166	0.35	-0.8
2,519,025	+		Shew_2166	0.46	-0.8
2,519,038	-		Shew_2166	0.46	-0.8
2,519,196	-		Shew_2166	0.50	-0.8
2,519,403	+		Shew_2166	0.56	-1.3
2,519,843	+		Shew_2166	0.67	-1.5
2,519,851	-		Shew_2166	0.67	-1.3
2,520,520	-		Shew_2166	0.84	-2.1
2,521,212	+				-0.5
2,521,306	-		Shew_2167	0.16	-1.0
2,521,599	+		Shew_2168	0.32	-0.0
2,521,599	+		Shew_2168	0.32	+0.2
2,521,705	+		Shew_2168	0.65	+0.2