Strain Fitness in Shewanella loihica PV-4 around Shew_1873

Experiment: Ceftazidime 5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 5 mg/ml
2,152,570	-				-1.2
2,152,819	-				-0.4
2,153,035	+				-0.1
2,153,323	+		Shew_1873	0.14	+0.2
2,153,569	-		Shew_1873	0.23	+1.8
2,153,622	-		Shew_1873	0.26	+0.3
2,153,687	+		Shew_1873	0.28	-0.6
2,153,880	+		Shew_1873	0.36	-0.3
2,153,888	-		Shew_1873	0.36	+0.2
2,154,571	-		Shew_1873	0.64	+0.3
2,154,650	+		Shew_1873	0.67	+0.6
2,154,759	-		Shew_1873	0.71	-0.2
2,155,131	+		Shew_1873	0.86	+2.5
2,155,158	-		Shew_1873	0.87	+0.1
2,155,164	-		Shew_1873	0.87	-0.9
2,155,190	-		Shew_1873	0.88	+0.4
2,155,478	-				+0.2
2,155,796	-		Shew_1874	0.14	+0.1
2,155,947	-		Shew_1874	0.24	+0.3
2,156,049	+		Shew_1874	0.30	-0.0
2,156,057	-		Shew_1874	0.31	-0.0
2,156,370	+		Shew_1874	0.51	+0.0