Strain Fitness in Shewanella loihica PV-4 around Shew_1812

Experiment: Ceftazidime 5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 5 mg/ml
2,083,137	+				+1.1
2,083,154	+				+0.8
2,083,169	+				+0.8
2,083,171	+				+1.0
2,083,247	+				+0.7
2,083,619	-		Shew_1812	0.27	+0.8
2,083,744	+		Shew_1812	0.33	+0.8
2,084,215	+		Shew_1812	0.55	+1.1
2,084,521	+		Shew_1812	0.70	+1.3
2,084,588	+		Shew_1812	0.73	+0.9
2,084,730	+		Shew_1812	0.79	+0.4
2,084,740	+		Shew_1812	0.80	+1.4
2,084,776	-		Shew_1812	0.82	+1.1
2,084,824	-		Shew_1812	0.84	+1.3
2,084,892	-		Shew_1812	0.87	+1.5
2,085,680	-		Shew_1814	0.15	+1.3
2,086,158	+		Shew_1814	0.39	+1.0
2,086,158	+		Shew_1814	0.39	+0.6