Strain Fitness in Shewanella loihica PV-4 around Shew_1787

Experiment: Ceftazidime 5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 5 mg/ml
2,044,031	+		Shew_1786	0.62	+0.1
2,044,064	+		Shew_1786	0.64	+0.2
2,044,215	+		Shew_1786	0.74	-1.1
2,044,607	-				-1.0
2,045,411	+		Shew_1787	0.46	+0.2
2,045,411	+		Shew_1787	0.46	+0.0
2,045,419	-		Shew_1787	0.46	+0.9
2,045,419	-		Shew_1787	0.46	+0.7
2,045,419	-		Shew_1787	0.46	+0.3
2,045,915	-		Shew_1787	0.82	+3.2
2,046,071	+				+0.2
2,047,124	-		Shew_1789	0.18	+0.0