Strain Fitness in Shewanella loihica PV-4 around Shew_1423

Experiment: Ceftazidime 5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 5 mg/ml
1,636,157	+				+0.3
1,636,166	-				-2.0
1,636,790	-		Shew_1422	0.69	-1.0
1,636,977	+				+0.7
1,637,098	-				+0.5
1,637,470	+		Shew_1423	0.26	-0.3
1,637,845	-		Shew_1423	0.52	-1.3
1,638,222	-		Shew_1423	0.78	-0.9
1,638,857	+				+0.1
1,638,885	-		Shew_1424	0.11	-0.3
1,639,123	+		Shew_1424	0.24	+1.7
1,639,158	-		Shew_1424	0.26	-0.3
1,639,299	-		Shew_1424	0.35	+1.0
1,639,420	-		Shew_1424	0.42	-0.1