Strain Fitness in Shewanella loihica PV-4 around Shew_1300

Experiment: Ceftazidime 5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 5 mg/ml
1,501,791	+				+0.5
1,502,544	-				-0.5
1,502,566	+				-0.5
1,502,566	+				-0.6
1,502,676	-				-0.2
1,502,866	-		Shew_1300	0.18	+0.5
1,503,343	+		Shew_1300	0.51	-1.4
1,503,348	-		Shew_1300	0.52	-0.4
1,503,404	+		Shew_1300	0.56	-1.3
1,503,711	-		Shew_1300	0.77	-1.6
1,503,758	-		Shew_1300	0.80	-0.3
1,503,895	+				-0.1
1,503,925	-				+1.6
1,504,265	+				+0.6
1,504,427	+				+0.1
1,504,546	-				+0.5
1,504,578	+				+0.6
1,504,836	-		Shew_1301	0.12	+0.2
1,504,883	+		Shew_1301	0.13	+0.3
1,504,883	+		Shew_1301	0.13	-0.9