Strain Fitness in Shewanella loihica PV-4 around Shew_1103

Experiment: Ceftazidime 5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 5 mg/ml
1,272,054	+				-0.1
1,272,238	+		Shew_1103	0.41	+0.7
1,272,284	+		Shew_1103	0.49	+0.3
1,272,284	+		Shew_1103	0.49	+0.1
1,272,284	+		Shew_1103	0.49	+0.1
1,272,284	+		Shew_1103	0.49	+0.1
1,272,284	+		Shew_1103	0.49	+0.0
1,272,284	+		Shew_1103	0.49	+0.6
1,272,284	+		Shew_1103	0.49	-0.0
1,272,292	-		Shew_1103	0.51	-0.5
1,272,292	-		Shew_1103	0.51	+0.7
1,272,292	-		Shew_1103	0.51	+1.1
1,272,292	-		Shew_1103	0.51	+0.3
1,272,292	-		Shew_1103	0.51	+0.6
1,272,292	-		Shew_1103	0.51	+1.0
1,272,292	-		Shew_1103	0.51	-0.2
1,272,292	-		Shew_1103	0.51	+0.1
1,272,453	+		Shew_1103	0.82	+1.4
1,272,758	-		Shew_1104	0.21	+0.7
1,272,762	+		Shew_1104	0.22	-0.6
1,272,823	+		Shew_1104	0.28	-0.1
1,272,828	+		Shew_1104	0.28	+1.0
1,272,828	+		Shew_1104	0.28	+0.3
1,272,828	+		Shew_1104	0.28	-0.0
1,272,838	+		Shew_1104	0.29	+0.2
1,272,857	+		Shew_1104	0.31	+0.7
1,272,857	+		Shew_1104	0.31	-0.0
1,272,865	-		Shew_1104	0.32	-0.0
1,272,942	+		Shew_1104	0.40	+0.8
1,273,086	+		Shew_1104	0.55	-0.0
1,273,093	+		Shew_1104	0.55	+0.1
1,273,101	-		Shew_1104	0.56	-1.0
1,273,103	+		Shew_1104	0.56	-0.3
1,273,103	+		Shew_1104	0.56	+0.4
1,273,103	+		Shew_1104	0.56	+0.7
1,273,103	+		Shew_1104	0.56	-0.2
1,273,103	+		Shew_1104	0.56	+0.9
1,273,103	+		Shew_1104	0.56	-0.2
1,273,103	+		Shew_1104	0.56	+0.6
1,273,103	+		Shew_1104	0.56	-0.8
1,273,103	+		Shew_1104	0.56	+0.3
1,273,103	+		Shew_1104	0.56	-0.5
1,273,103	+		Shew_1104	0.56	-0.4
1,273,103	+		Shew_1104	0.56	-0.7
1,273,103	+		Shew_1104	0.56	-0.4
1,273,111	-		Shew_1104	0.57	-1.2
1,273,111	-		Shew_1104	0.57	-0.4
1,273,111	-		Shew_1104	0.57	+2.8
1,273,111	-		Shew_1104	0.57	+0.1
1,273,111	-		Shew_1104	0.57	-2.8
1,273,111	-		Shew_1104	0.57	+0.2
1,273,111	-		Shew_1104	0.57	-0.1
1,273,111	-		Shew_1104	0.57	-0.4
1,273,111	-		Shew_1104	0.57	+0.8
1,273,111	-		Shew_1104	0.57	-1.0
1,273,111	-		Shew_1104	0.57	-1.0
1,273,111	-		Shew_1104	0.57	-0.2
1,273,111	-		Shew_1104	0.57	-0.3
1,273,121	-		Shew_1104	0.58	+0.3
1,273,128	-		Shew_1104	0.59	-0.9
1,273,130	-		Shew_1104	0.59	-1.0
1,273,188	+		Shew_1104	0.65	-0.9
1,273,298	-		Shew_1104	0.76	-0.5
1,273,298	-		Shew_1104	0.76	+1.3
1,273,298	-		Shew_1104	0.76	+0.8
1,273,319	-		Shew_1104	0.78	+0.8
1,273,319	-		Shew_1104	0.78	+0.0
1,273,354	+		Shew_1104	0.82	+0.3
1,273,354	+		Shew_1104	0.82	-0.5
1,273,389	+		Shew_1104	0.85	-0.6
1,273,394	+		Shew_1104	0.86	-0.3
1,273,394	+		Shew_1104	0.86	+1.0
1,273,402	-		Shew_1104	0.87	+0.7
1,273,440	+				+0.4
1,273,446	+				-0.9
1,273,483	+				-0.6
1,273,505	-				+0.2
1,273,520	+				+0.4