Strain Fitness in Shewanella loihica PV-4 around Shew_0895

Experiment: Ceftazidime 5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 5 mg/ml
1,014,805	+		Shew_0893	0.53	+0.0
1,014,858	-		Shew_0893	0.62	+1.8
1,014,911	-		Shew_0893	0.72	+0.1
1,015,053	-				-0.9
1,015,157	+				-0.8
1,015,733	-		Shew_0895	0.10	-1.1
1,015,833	+		Shew_0895	0.18	-0.2
1,016,083	+		Shew_0895	0.37	-0.8
1,016,093	+		Shew_0895	0.38	-0.9
1,016,197	+		Shew_0895	0.46	-1.0
1,016,327	+		Shew_0895	0.56	-1.2
1,016,335	-		Shew_0895	0.57	-0.6
1,016,428	-		Shew_0895	0.64	-0.8
1,016,693	+		Shew_0895	0.85	-0.7
1,016,855	+				-1.3
1,016,867	-				-1.0
1,016,867	-				-0.5
1,017,316	+		Shew_0896	0.59	-0.5
1,017,406	+		Shew_0896	0.71	-1.4
1,017,406	+		Shew_0896	0.71	-0.6
1,017,414	-		Shew_0896	0.72	-0.9
1,017,414	-		Shew_0896	0.72	-1.0
1,017,414	-		Shew_0896	0.72	-0.1
1,017,414	-		Shew_0896	0.72	-2.3
1,017,414	-		Shew_0896	0.72	-1.2
1,017,414	-		Shew_0896	0.72	-1.6
1,017,484	-		Shew_0896	0.82	-0.4
1,017,775	+		Shew_0897	0.41	-2.4
1,017,851	-		Shew_0897	0.60	-1.3