Strain Fitness in Shewanella loihica PV-4 around Shew_0763

Experiment: Ceftazidime 5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 5 mg/ml
866,404	-				+0.2
866,404	-				+0.6
866,404	-				+0.1
866,404	-				-0.1
866,404	-				+0.6
866,404	-				-0.1
866,404	-				+0.1
866,404	-				+0.6
866,425	+				+0.3
866,516	+				+0.2
866,524	-				+0.2
866,524	-				-0.6
866,524	-				+0.3
866,524	-				+0.2
866,524	-				-1.1
866,524	-				+0.1
866,524	-				+0.7
866,524	-				+0.3
866,524	-				+0.5
866,524	-				+0.9
866,563	+				-0.5
866,784	-				-0.3
866,875	+				+0.3
866,875	+				-0.4
867,011	+				-0.7
867,088	+				-0.3
867,089	+				-0.1
867,089	+				+1.9
867,097	-				+0.4
867,327	+				-0.1
867,499	+				-1.2
867,505	-				-2.8
867,632	+		Shew_0763	0.10	-2.7
867,685	-		Shew_0763	0.13	-2.3
868,180	-		Shew_0763	0.35	-2.1
868,989	-		Shew_0763	0.72	-2.5
869,055	+		Shew_0763	0.75	-2.6
869,135	+		Shew_0763	0.78	-2.8
869,301	+		Shew_0763	0.86	-3.6
869,388	+		Shew_0763	0.90	-3.9
869,450	-				-2.0
870,182	-		Shew_0764	0.62	-0.0
870,222	+		Shew_0764	0.69	+0.1
870,335	-		Shew_0764	0.88	+0.1
870,396	-				+0.1
870,402	+				+0.1
870,545	+				-0.4