Experiment: Ceftazidime 5 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0668 and Shew_0669 are separated by 101 nucleotides Shew_0669 and Shew_0670 are separated by 116 nucleotides Shew_0670 and Shew_0671 are separated by 44 nucleotides
Shew_0668: Shew_0668 - hypothetical protein (RefSeq), at 760,155 to 761,870
_0668
Shew_0669: Shew_0669 - redoxin domain-containing protein (RefSeq), at 761,972 to 762,502
_0669
Shew_0670: Shew_0670 - hypothetical protein (RefSeq), at 762,619 to 764,085
_0670
Shew_0671: Shew_0671 - phospholipase A(1) (RefSeq), at 764,130 to 765,056
_0671
Position (kb) 762
763
764
765 Strain fitness (log2 ratio) -1
0
1 at 761.806 kb on - strand at 761.853 kb on - strand at 761.858 kb on - strand at 762.071 kb on + strand, within Shew_0669 at 762.243 kb on + strand, within Shew_0669 at 762.438 kb on + strand, within Shew_0669 at 762.438 kb on + strand, within Shew_0669 at 762.438 kb on + strand, within Shew_0669 at 762.864 kb on + strand, within Shew_0670 at 762.872 kb on - strand, within Shew_0670 at 762.872 kb on - strand, within Shew_0670 at 762.886 kb on - strand, within Shew_0670 at 763.047 kb on + strand, within Shew_0670 at 763.055 kb on - strand, within Shew_0670 at 763.092 kb on + strand, within Shew_0670 at 763.111 kb on + strand, within Shew_0670 at 763.119 kb on - strand, within Shew_0670 at 763.140 kb on + strand, within Shew_0670 at 763.140 kb on + strand, within Shew_0670 at 763.148 kb on - strand, within Shew_0670 at 763.378 kb on + strand, within Shew_0670 at 763.396 kb on - strand, within Shew_0670 at 763.438 kb on + strand, within Shew_0670 at 763.633 kb on - strand, within Shew_0670 at 763.749 kb on + strand, within Shew_0670 at 763.850 kb on + strand, within Shew_0670 at 763.935 kb on + strand, within Shew_0670 at 764.027 kb on - strand at 764.470 kb on - strand, within Shew_0671 at 764.536 kb on + strand, within Shew_0671 at 764.667 kb on + strand, within Shew_0671 at 764.758 kb on - strand, within Shew_0671 at 764.908 kb on - strand, within Shew_0671 at 764.952 kb on - strand, within Shew_0671
Per-strain Table
Position Strand Gene LocusTag Fraction Ceftazidime 5 mg/ml remove 761,806 - +0.2 761,853 - +0.3 761,858 - +0.3 762,071 + Shew_0669 0.19 +0.4 762,243 + Shew_0669 0.51 -0.1 762,438 + Shew_0669 0.88 +0.1 762,438 + Shew_0669 0.88 +0.3 762,438 + Shew_0669 0.88 +0.2 762,864 + Shew_0670 0.17 -0.1 762,872 - Shew_0670 0.17 -0.2 762,872 - Shew_0670 0.17 +0.3 762,886 - Shew_0670 0.18 +0.1 763,047 + Shew_0670 0.29 -0.3 763,055 - Shew_0670 0.30 -0.3 763,092 + Shew_0670 0.32 -0.5 763,111 + Shew_0670 0.34 -0.6 763,119 - Shew_0670 0.34 -0.4 763,140 + Shew_0670 0.36 +0.0 763,140 + Shew_0670 0.36 -0.2 763,148 - Shew_0670 0.36 -1.0 763,378 + Shew_0670 0.52 +0.5 763,396 - Shew_0670 0.53 -0.4 763,438 + Shew_0670 0.56 -0.3 763,633 - Shew_0670 0.69 -0.2 763,749 + Shew_0670 0.77 -0.9 763,850 + Shew_0670 0.84 -0.3 763,935 + Shew_0670 0.90 +0.7 764,027 - -0.3 764,470 - Shew_0671 0.37 +0.1 764,536 + Shew_0671 0.44 -0.2 764,667 + Shew_0671 0.58 +0.4 764,758 - Shew_0671 0.68 -0.5 764,908 - Shew_0671 0.84 +0.1 764,952 - Shew_0671 0.89 +0.0
Or see this region's nucleotide sequence