Strain Fitness in Shewanella loihica PV-4 around Shew_0533

Experiment: Ceftazidime 5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 5 mg/ml
602,879	-		Shew_0532	0.27	-0.6
602,879	-		Shew_0532	0.27	+0.0
602,982	+		Shew_0532	0.37	+0.5
602,982	+		Shew_0532	0.37	+0.0
602,990	-		Shew_0532	0.38	+0.3
602,990	-		Shew_0532	0.38	+1.9
603,018	+		Shew_0532	0.41	+0.4
603,112	-		Shew_0532	0.50	-0.1
603,523	+		Shew_0532	0.90	-0.4
603,528	+				-0.0
603,528	+				+0.1
603,711	-				-0.1
604,062	+		Shew_0533	0.11	-1.2
604,080	-		Shew_0533	0.11	-1.5
604,462	+		Shew_0533	0.25	-2.5
604,643	-		Shew_0533	0.31	-1.4
604,643	-		Shew_0533	0.31	-1.2
604,725	-		Shew_0533	0.34	-1.6
604,817	+		Shew_0533	0.37	-1.5
604,894	+		Shew_0533	0.40	-1.8
604,902	-		Shew_0533	0.40	-1.7
605,096	+		Shew_0533	0.47	-1.4
605,152	+		Shew_0533	0.49	+0.5
605,308	+		Shew_0533	0.55	-2.3
605,308	+		Shew_0533	0.55	-2.7
605,415	+		Shew_0533	0.59	-1.7
605,444	+		Shew_0533	0.60	-1.3
605,543	+		Shew_0533	0.63	-0.7
605,543	+		Shew_0533	0.63	-2.4
605,609	-		Shew_0533	0.65	-1.5
605,738	+		Shew_0533	0.70	-1.6
605,962	+		Shew_0533	0.78	-1.7
606,076	-		Shew_0533	0.82	-0.9
606,094	-		Shew_0533	0.83	-1.4
606,370	+				-2.3
606,442	-				-1.7
606,466	-				-1.6
606,493	+				-2.9
606,571	+				+0.1
606,593	+				-0.9
606,806	+				-0.2
606,806	+				-1.5
606,806	+				-0.0
606,806	+				+0.8
606,806	+				+0.1
606,806	+				+0.2
606,814	-				-0.3
606,814	-				-0.1
607,367	-		Shew_0534	0.42	+0.3