Strain Fitness in Shewanella loihica PV-4 around Shew_0277

Experiment: Ceftazidime 5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 5 mg/ml
293,649	+		Shew_0276	0.59	+0.0
293,649	+		Shew_0276	0.59	-0.5
293,657	-		Shew_0276	0.59	-0.8
293,664	+		Shew_0276	0.60	+0.7
293,745	+		Shew_0276	0.65	-0.2
293,753	-		Shew_0276	0.66	+0.8
294,134	-				+0.6
294,202	+				-0.0
294,301	+				+0.5
294,378	+				+0.8
294,434	+				-0.1
294,443	-				+0.2
294,722	+		Shew_0277	0.15	+0.2
294,932	-		Shew_0277	0.42	-0.2
294,953	-		Shew_0277	0.44	-0.3
294,955	-		Shew_0277	0.45	-0.1
294,964	+		Shew_0277	0.46	-0.1
295,250	-		Shew_0277	0.82	-1.1
295,315	-				+0.0
295,331	+				-0.2
295,337	-				+0.5
295,339	-				+0.6
295,414	-				-0.3
295,520	-				+0.2
295,520	-				+0.2
295,520	-				+0.6
295,633	-				-0.0
295,728	+				-0.4
295,779	+				-0.1
295,872	-		Shew_0278	0.18	+0.1
295,926	+		Shew_0278	0.23	-0.1
295,926	+		Shew_0278	0.23	+0.1
296,070	+		Shew_0278	0.36	-0.2
296,140	-		Shew_0278	0.42	-0.0