Strain Fitness in Shewanella loihica PV-4 around Shew_0093

Experiment: Ceftazidime 5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ceftazidime 5 mg/ml
104,505	+				+0.5
104,513	-				+0.5
104,535	+				+0.1
104,538	-				-0.2
104,863	+		Shew_0092	0.46	-0.3
105,010	-		Shew_0092	0.64	-0.2
105,010	-		Shew_0092	0.64	+0.2
105,105	+		Shew_0092	0.75	+0.1
105,356	-				+1.0
105,424	+		Shew_0093	0.17	-0.8
105,442	+		Shew_0093	0.20	-0.4
105,481	-		Shew_0093	0.25	+0.7
105,505	-		Shew_0093	0.29	-0.3
105,585	+		Shew_0093	0.41	-0.5
105,593	-		Shew_0093	0.42	-0.2
105,721	-		Shew_0093	0.61	+0.8
105,765	+		Shew_0093	0.67	-0.8
105,773	-		Shew_0093	0.68	-2.1
105,934	+				-0.1
106,087	+		Shew_0094	0.11	-0.3
106,098	+		Shew_0094	0.12	-0.2
106,137	-		Shew_0094	0.15	+0.2
106,265	+		Shew_0094	0.27	+0.1
106,303	-		Shew_0094	0.30	+0.1
106,364	-		Shew_0094	0.36	+0.1
106,407	+		Shew_0094	0.39	-0.3
106,412	+		Shew_0094	0.40	-0.5
106,415	-		Shew_0094	0.40	-1.3
106,415	-		Shew_0094	0.40	-1.0
106,420	-		Shew_0094	0.41	+0.2
106,420	-		Shew_0094	0.41	+0.1
106,607	+		Shew_0094	0.57	-0.3
106,628	-		Shew_0094	0.59	-0.4
106,641	+		Shew_0094	0.61	+0.0
106,641	+		Shew_0094	0.61	-0.8
106,641	+		Shew_0094	0.61	-2.0
106,909	+		Shew_0094	0.85	-0.3
106,975	-				+0.2