Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4888

Experiment: L-Lysine 25 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lysine 25 mM
5,635,532	-		Pf6N2E2_4886	0.82	-0.3
5,635,597	+		Pf6N2E2_4886	0.87	-1.0
5,635,597	+		Pf6N2E2_4886	0.87	-0.4
5,635,598	-		Pf6N2E2_4886	0.87	-2.2
5,635,598	-		Pf6N2E2_4886	0.87	-1.7
5,635,600	+		Pf6N2E2_4886	0.87	-0.6
5,635,600	+		Pf6N2E2_4886	0.87	-1.0
5,635,600	+		Pf6N2E2_4886	0.87	+0.5
5,635,600	+		Pf6N2E2_4886	0.87	+0.4
5,635,601	-		Pf6N2E2_4886	0.87	-1.8
5,635,601	-		Pf6N2E2_4886	0.87	-1.0
5,635,601	-		Pf6N2E2_4886	0.87	-1.8
5,635,782	+				-0.7
5,635,787	-				-0.0
5,635,836	-				+0.5
5,635,839	+				+0.5
5,635,840	-				+0.3
5,635,873	-				-0.1
5,635,913	+				+0.7
5,635,913	+				+0.6
5,635,914	-				-0.5
5,635,940	+				+0.6
5,635,940	+				-0.3
5,635,940	+				+0.1
5,635,941	-				+0.5
5,635,941	-				-0.4
5,635,941	-				+1.5
5,635,967	-				-1.1
5,635,967	-				-0.2
5,635,975	-				+0.9
5,636,020	-		Pf6N2E2_4887	0.16	+0.1
5,636,020	-		Pf6N2E2_4887	0.16	+0.1
5,636,020	-		Pf6N2E2_4887	0.16	+0.2
5,636,040	+		Pf6N2E2_4887	0.20	-0.2
5,636,040	+		Pf6N2E2_4887	0.20	+0.9
5,636,040	+		Pf6N2E2_4887	0.20	+0.9
5,636,040	+		Pf6N2E2_4887	0.20	+0.2
5,636,041	-		Pf6N2E2_4887	0.20	-0.1
5,636,041	-		Pf6N2E2_4887	0.20	-0.5
5,636,067	+		Pf6N2E2_4887	0.26	+0.4
5,636,067	+		Pf6N2E2_4887	0.26	+0.2
5,636,067	+		Pf6N2E2_4887	0.26	+0.3
5,636,068	-		Pf6N2E2_4887	0.26	+0.1
5,636,076	-		Pf6N2E2_4887	0.28	+0.6
5,636,226	+		Pf6N2E2_4887	0.60	-0.4
5,636,226	+		Pf6N2E2_4887	0.60	-0.2
5,636,227	-		Pf6N2E2_4887	0.60	+0.0
5,636,283	+		Pf6N2E2_4887	0.72	-0.1
5,636,283	+		Pf6N2E2_4887	0.72	-0.4
5,636,284	-		Pf6N2E2_4887	0.72	-0.2
5,636,284	-		Pf6N2E2_4887	0.72	+0.3
5,636,284	-		Pf6N2E2_4887	0.72	-0.4
5,636,284	-		Pf6N2E2_4887	0.72	+0.5
5,636,284	-		Pf6N2E2_4887	0.72	+0.5
5,636,336	+		Pf6N2E2_4887	0.84	+1.3
5,636,336	+		Pf6N2E2_4887	0.84	-0.0
5,636,336	+		Pf6N2E2_4887	0.84	+0.2
5,636,336	+		Pf6N2E2_4887	0.84	-0.5
5,636,336	+		Pf6N2E2_4887	0.84	+0.8
5,636,336	+		Pf6N2E2_4887	0.84	+0.6
5,636,337	-		Pf6N2E2_4887	0.84	-0.5
5,636,337	-		Pf6N2E2_4887	0.84	-0.5
5,636,337	-		Pf6N2E2_4887	0.84	-0.2
5,636,337	-		Pf6N2E2_4887	0.84	+0.8
5,636,340	+		Pf6N2E2_4887	0.85	-0.6
5,636,340	+		Pf6N2E2_4887	0.85	+0.1
5,636,340	+		Pf6N2E2_4887	0.85	+0.0
5,636,341	-		Pf6N2E2_4887	0.85	+0.0
5,636,341	-		Pf6N2E2_4887	0.85	-0.3
5,636,391	+				-1.5
5,636,560	+				-0.6
5,636,560	+				-0.6
5,636,560	+				-0.4
5,636,560	+				-2.2
5,636,561	-				-0.6
5,636,561	-				-1.0
5,636,561	-				-0.3
5,636,573	-				-0.3
5,636,573	-				-1.3
5,636,573	-				-1.0
5,636,619	+				-0.8
5,636,620	-				-0.3
5,636,709	+				-1.9
5,636,709	+				-0.7
5,636,710	-				-1.6
5,636,710	-				-0.1
5,636,710	-				-0.9
5,636,710	-				-0.2
5,636,710	-				-0.4
5,636,710	-				-0.6
5,636,710	-				-0.1
5,636,714	+				-1.3
5,636,714	+				-1.0
5,636,714	+				-0.4
5,636,714	+				+1.3
5,636,715	-				-1.4
5,636,715	-				-0.8
5,636,715	-				-1.2
5,636,715	-				-1.1
5,636,802	-				-0.9
5,636,803	+				-0.2
5,636,803	+				-0.2
5,636,803	+				-0.9
5,636,803	+				+0.1
5,636,803	+				+1.1
5,636,803	+				-3.0
5,636,804	-				-0.8
5,636,804	-				-0.7
5,636,804	-				-0.5
5,636,804	-				+0.1
5,636,804	-				-0.5
5,636,804	-				+0.3
5,636,804	-				+0.1
5,636,804	-				-1.5
5,636,804	-				-1.3
5,636,804	-				-2.7
5,636,804	-				-1.0
5,636,905	+		Pf6N2E2_4888	0.13	-1.2
5,636,905	+		Pf6N2E2_4888	0.13	-0.6
5,636,905	+		Pf6N2E2_4888	0.13	-0.6
5,636,905	+		Pf6N2E2_4888	0.13	-1.3
5,636,905	+		Pf6N2E2_4888	0.13	+0.0
5,636,906	-		Pf6N2E2_4888	0.13	-1.4
5,636,906	-		Pf6N2E2_4888	0.13	-1.2
5,636,906	-		Pf6N2E2_4888	0.13	+0.1
5,636,906	-		Pf6N2E2_4888	0.13	-0.1
5,636,906	-		Pf6N2E2_4888	0.13	+0.1
5,636,906	-		Pf6N2E2_4888	0.13	-0.4
5,636,906	-		Pf6N2E2_4888	0.13	-0.5
5,637,025	+		Pf6N2E2_4888	0.18	-1.0
5,637,025	+		Pf6N2E2_4888	0.18	-0.4
5,637,026	-		Pf6N2E2_4888	0.18	-0.0
5,637,026	-		Pf6N2E2_4888	0.18	-0.6
5,637,026	-		Pf6N2E2_4888	0.18	-0.5
5,637,052	+		Pf6N2E2_4888	0.19	-0.9
5,637,052	+		Pf6N2E2_4888	0.19	-2.3
5,637,053	-		Pf6N2E2_4888	0.19	-0.5
5,637,081	+		Pf6N2E2_4888	0.20	-1.0
5,637,081	+		Pf6N2E2_4888	0.20	-0.6
5,637,082	-		Pf6N2E2_4888	0.20	-0.1
5,637,082	-		Pf6N2E2_4888	0.20	-1.3
5,637,085	+		Pf6N2E2_4888	0.20	+0.2
5,637,085	+		Pf6N2E2_4888	0.20	-0.0
5,637,085	+		Pf6N2E2_4888	0.20	+0.5
5,637,085	+		Pf6N2E2_4888	0.20	-0.9
5,637,085	+		Pf6N2E2_4888	0.20	-1.4
5,637,085	+		Pf6N2E2_4888	0.20	-2.3
5,637,085	+		Pf6N2E2_4888	0.20	-1.7
5,637,085	+		Pf6N2E2_4888	0.20	-0.8
5,637,085	+		Pf6N2E2_4888	0.20	-0.7
5,637,085	+		Pf6N2E2_4888	0.20	-0.8
5,637,085	+		Pf6N2E2_4888	0.20	-0.4
5,637,085	+		Pf6N2E2_4888	0.20	+0.7
5,637,085	+		Pf6N2E2_4888	0.20	-0.1
5,637,085	+		Pf6N2E2_4888	0.20	-0.6
5,637,085	+		Pf6N2E2_4888	0.20	-1.1
5,637,085	+		Pf6N2E2_4888	0.20	-0.3
5,637,085	+		Pf6N2E2_4888	0.20	-2.5
5,637,086	-		Pf6N2E2_4888	0.20	-1.3
5,637,086	-		Pf6N2E2_4888	0.20	-1.1
5,637,086	-		Pf6N2E2_4888	0.20	-0.1
5,637,086	-		Pf6N2E2_4888	0.20	-1.3
5,637,086	-		Pf6N2E2_4888	0.20	-0.4
5,637,086	-		Pf6N2E2_4888	0.20	-1.2
5,637,086	-		Pf6N2E2_4888	0.20	-0.2
5,637,086	-		Pf6N2E2_4888	0.20	-1.3
5,637,086	-		Pf6N2E2_4888	0.20	-0.6
5,637,086	-		Pf6N2E2_4888	0.20	-0.7
5,637,086	-		Pf6N2E2_4888	0.20	-0.3
5,637,086	-		Pf6N2E2_4888	0.20	-1.4
5,637,086	-		Pf6N2E2_4888	0.20	-2.9
5,637,086	-		Pf6N2E2_4888	0.20	-0.7
5,637,086	-		Pf6N2E2_4888	0.20	-0.7
5,637,252	-		Pf6N2E2_4888	0.26	-0.8
5,637,253	+		Pf6N2E2_4888	0.26	+0.5
5,637,253	+		Pf6N2E2_4888	0.26	-0.7
5,637,253	+		Pf6N2E2_4888	0.26	-0.2
5,637,254	-		Pf6N2E2_4888	0.26	-1.2
5,637,254	-		Pf6N2E2_4888	0.26	-1.8
5,637,254	-		Pf6N2E2_4888	0.26	-1.2
5,637,254	-		Pf6N2E2_4888	0.26	-0.9
5,637,551	+		Pf6N2E2_4888	0.36	-2.0
5,637,551	+		Pf6N2E2_4888	0.36	+0.0
5,637,552	-		Pf6N2E2_4888	0.36	-1.1
5,637,552	-		Pf6N2E2_4888	0.36	+0.1
5,637,552	-		Pf6N2E2_4888	0.36	-0.4
5,637,592	+		Pf6N2E2_4888	0.38	-1.9
5,637,592	+		Pf6N2E2_4888	0.38	-0.6
5,637,593	-		Pf6N2E2_4888	0.38	-1.3
5,637,653	+		Pf6N2E2_4888	0.40	+0.0
5,637,697	+		Pf6N2E2_4888	0.41	-2.6
5,637,697	+		Pf6N2E2_4888	0.41	-0.9
5,637,697	+		Pf6N2E2_4888	0.41	-0.1
5,637,698	-		Pf6N2E2_4888	0.41	-2.0
5,637,835	+		Pf6N2E2_4888	0.46	-0.9
5,637,835	+		Pf6N2E2_4888	0.46	-0.1
5,637,835	+		Pf6N2E2_4888	0.46	-0.2
5,637,835	+		Pf6N2E2_4888	0.46	-0.1
5,637,835	+		Pf6N2E2_4888	0.46	-0.2
5,637,835	+		Pf6N2E2_4888	0.46	-0.6
5,637,835	+		Pf6N2E2_4888	0.46	-0.3
5,637,835	+		Pf6N2E2_4888	0.46	-0.9
5,637,835	+		Pf6N2E2_4888	0.46	-0.4
5,637,835	+		Pf6N2E2_4888	0.46	-1.3
5,637,835	+		Pf6N2E2_4888	0.46	-0.4
5,637,835	+		Pf6N2E2_4888	0.46	-1.3
5,637,835	+		Pf6N2E2_4888	0.46	+0.1
5,637,836	-		Pf6N2E2_4888	0.46	-1.8
5,637,836	-		Pf6N2E2_4888	0.46	+0.3
5,637,836	-		Pf6N2E2_4888	0.46	-1.2
5,637,836	-		Pf6N2E2_4888	0.46	-0.3
5,637,836	-		Pf6N2E2_4888	0.46	-0.4
5,637,836	-		Pf6N2E2_4888	0.46	+0.0
5,637,836	-		Pf6N2E2_4888	0.46	+0.0
5,637,836	-		Pf6N2E2_4888	0.46	-2.2
5,637,836	-		Pf6N2E2_4888	0.46	-0.9
5,637,836	-		Pf6N2E2_4888	0.46	-0.4
5,637,836	-		Pf6N2E2_4888	0.46	-0.4
5,637,836	-		Pf6N2E2_4888	0.46	-1.0
5,637,836	-		Pf6N2E2_4888	0.46	-0.5
5,637,836	-		Pf6N2E2_4888	0.46	-0.2
5,637,836	-		Pf6N2E2_4888	0.46	-1.0
5,637,836	-		Pf6N2E2_4888	0.46	-1.1
5,637,836	-		Pf6N2E2_4888	0.46	-0.1
5,637,836	-		Pf6N2E2_4888	0.46	+0.1
5,637,836	-		Pf6N2E2_4888	0.46	-2.0
5,637,881	+		Pf6N2E2_4888	0.48	+0.1
5,637,934	+		Pf6N2E2_4888	0.50	-0.8
5,637,934	+		Pf6N2E2_4888	0.50	-1.1
5,637,935	-		Pf6N2E2_4888	0.50	-0.8
5,637,935	-		Pf6N2E2_4888	0.50	-0.7
5,638,285	+		Pf6N2E2_4888	0.62	+0.1
5,638,285	+		Pf6N2E2_4888	0.62	-1.4
5,638,285	+		Pf6N2E2_4888	0.62	-1.0
5,638,286	-		Pf6N2E2_4888	0.62	-1.0
5,638,286	-		Pf6N2E2_4888	0.62	-0.0
5,638,286	-		Pf6N2E2_4888	0.62	-0.9
5,638,365	-		Pf6N2E2_4888	0.65	-1.3
5,638,381	+		Pf6N2E2_4888	0.65	-1.3
5,638,381	+		Pf6N2E2_4888	0.65	-0.9
5,638,382	-		Pf6N2E2_4888	0.65	+0.4
5,638,382	-		Pf6N2E2_4888	0.65	-0.6
5,638,417	+		Pf6N2E2_4888	0.67	-0.6
5,638,418	-		Pf6N2E2_4888	0.67	-2.8
5,638,418	-		Pf6N2E2_4888	0.67	-2.6
5,638,418	-		Pf6N2E2_4888	0.67	-0.0
5,638,418	-		Pf6N2E2_4888	0.67	-0.2
5,639,027	-		Pf6N2E2_4888	0.88	+0.6
5,639,027	-		Pf6N2E2_4888	0.88	-0.4
5,639,027	-		Pf6N2E2_4888	0.88	-0.0
5,639,027	-		Pf6N2E2_4888	0.88	-0.4
5,639,047	+		Pf6N2E2_4888	0.89	-0.8
5,639,047	+		Pf6N2E2_4888	0.89	-2.2
5,639,047	+		Pf6N2E2_4888	0.89	-0.8
5,639,048	-		Pf6N2E2_4888	0.89	-2.5
5,639,048	-		Pf6N2E2_4888	0.89	-0.6
5,639,048	-		Pf6N2E2_4888	0.89	-1.0
5,639,048	-		Pf6N2E2_4888	0.89	-2.6
5,639,048	-		Pf6N2E2_4888	0.89	-0.2
5,639,203	+				-1.7
5,639,204	-				+0.2
5,639,204	-				-0.4
5,639,225	-				-0.1
5,639,225	-				-1.6
5,639,391	+				-0.2
5,639,391	+				+0.3
5,639,392	-				+0.6
5,639,397	+				-0.6
5,639,397	+				-1.2
5,639,397	+				-1.3
5,639,397	+				-1.9
5,639,397	+				-2.5
5,639,397	+				-1.2
5,639,397	+				-0.9
5,639,397	+				-0.9
5,639,397	+				-2.9
5,639,398	-				-0.7
5,639,398	-				-0.1
5,639,398	-				+0.8
5,639,410	-				+0.1
5,639,450	+				-0.8
5,639,450	+				-0.9
5,639,450	+				-3.1
5,639,450	+				+0.3
5,639,450	+				-1.2
5,639,450	+				-0.3
5,639,450	+				-2.2
5,639,450	+				+0.4
5,639,450	+				-1.8
5,639,450	+				-1.2
5,639,450	+				+0.0
5,639,451	-				-0.9
5,639,451	-				-0.3
5,639,451	-				+1.0
5,639,451	-				-0.1
5,639,451	-				-0.5
5,639,451	-				+0.1
5,639,451	-				-0.4
5,639,451	-				+0.8
5,639,451	-				+0.4
5,639,451	-				+0.7
5,639,481	+				-2.1
5,639,481	+				-0.2
5,639,481	+				-2.1
5,639,482	-				+0.6
5,639,482	-				+0.1
5,639,483	+				-1.8
5,639,483	+				-0.9
5,639,483	+				-2.6
5,639,483	+				-1.8
5,639,483	+				-0.1
5,639,484	-				-0.3
5,639,484	-				+1.2
5,639,484	-				+0.4
5,639,484	-				+0.2
5,639,484	-				-0.3
5,639,484	-				-0.2
5,639,507	+				-1.2
5,639,507	+				-1.3
5,639,620	+				-1.8
5,639,620	+				-1.2
5,639,717	+		Pf6N2E2_4889	0.13	+0.1
5,639,788	+		Pf6N2E2_4889	0.18	+0.2
5,639,793	-		Pf6N2E2_4889	0.18	-0.8
5,639,793	-		Pf6N2E2_4889	0.18	+0.2
5,639,793	-		Pf6N2E2_4889	0.18	+0.2
5,639,873	-		Pf6N2E2_4889	0.24	+0.0
5,639,873	-		Pf6N2E2_4889	0.24	-0.4
5,639,873	-		Pf6N2E2_4889	0.24	-0.7
5,640,309	-		Pf6N2E2_4889	0.55	-0.8
5,640,359	+		Pf6N2E2_4889	0.59	+0.3
5,640,359	+		Pf6N2E2_4889	0.59	-0.1
5,640,359	+		Pf6N2E2_4889	0.59	+0.4