Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4778

Experiment: L-Lysine 25 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lysine 25 mM
5,518,911	-				-0.2
5,519,051	+				-0.0
5,519,052	-				+0.7
5,519,123	+				-1.1
5,519,123	+				-1.0
5,519,123	+				-0.3
5,519,123	+				-0.2
5,519,123	+				-0.1
5,519,123	+				+0.3
5,519,123	+				+0.6
5,519,124	-				+0.2
5,519,124	-				+0.6
5,519,124	-				+0.0
5,519,124	-				+0.4
5,519,124	-				+0.3
5,519,129	+				-0.8
5,519,129	+				-0.0
5,519,130	-				-0.6
5,519,130	-				-0.7
5,519,276	+		Pf6N2E2_4777	0.25	-1.0
5,519,285	+		Pf6N2E2_4777	0.27	+0.3
5,519,286	-		Pf6N2E2_4777	0.27	-0.5
5,519,348	+		Pf6N2E2_4777	0.34	-0.2
5,519,348	+		Pf6N2E2_4777	0.34	-1.9
5,519,349	-		Pf6N2E2_4777	0.35	-0.4
5,519,349	-		Pf6N2E2_4777	0.35	+0.9
5,519,435	+		Pf6N2E2_4777	0.45	+0.3
5,519,436	-		Pf6N2E2_4777	0.46	-0.4
5,519,546	+		Pf6N2E2_4777	0.59	-0.3
5,519,546	+		Pf6N2E2_4777	0.59	-0.6
5,519,594	+		Pf6N2E2_4777	0.65	-0.5
5,519,595	-		Pf6N2E2_4777	0.66	-0.6
5,519,595	-		Pf6N2E2_4777	0.66	+0.2
5,519,595	-		Pf6N2E2_4777	0.66	-1.2
5,519,630	+		Pf6N2E2_4777	0.70	+0.1
5,519,630	+		Pf6N2E2_4777	0.70	+1.2
5,519,630	+		Pf6N2E2_4777	0.70	+1.0
5,519,631	-		Pf6N2E2_4777	0.70	-0.1
5,519,631	-		Pf6N2E2_4777	0.70	+0.3
5,519,694	-		Pf6N2E2_4777	0.78	+0.7
5,519,694	-		Pf6N2E2_4777	0.78	+0.2
5,519,707	+		Pf6N2E2_4777	0.80	-0.1
5,519,707	+		Pf6N2E2_4777	0.80	-0.4
5,519,735	+		Pf6N2E2_4777	0.83	-1.7
5,519,852	+				+0.8
5,519,853	-				-0.4
5,519,860	+				-0.4
5,519,872	+				-0.3
5,519,872	+				-0.6
5,519,873	-				+0.1
5,519,873	-				+0.2
5,519,873	-				-0.3
5,519,873	-				+0.1
5,519,873	-				-1.6
5,519,873	-				-0.3
5,519,882	+				-0.9
5,519,882	+				-0.7
5,519,882	+				-0.2
5,519,883	-				-0.5
5,520,001	+				-0.6
5,520,101	+		Pf6N2E2_4778	0.13	-1.3
5,520,101	+		Pf6N2E2_4778	0.13	-1.0
5,520,101	+		Pf6N2E2_4778	0.13	-0.9
5,520,101	+		Pf6N2E2_4778	0.13	-2.0
5,520,101	+		Pf6N2E2_4778	0.13	-1.5
5,520,101	+		Pf6N2E2_4778	0.13	-1.6
5,520,101	+		Pf6N2E2_4778	0.13	-2.1
5,520,101	+		Pf6N2E2_4778	0.13	-0.2
5,520,101	+		Pf6N2E2_4778	0.13	-0.5
5,520,101	+		Pf6N2E2_4778	0.13	+1.5
5,520,102	-		Pf6N2E2_4778	0.13	+0.5
5,520,102	-		Pf6N2E2_4778	0.13	-0.2
5,520,102	-		Pf6N2E2_4778	0.13	-1.3
5,520,102	-		Pf6N2E2_4778	0.13	-0.7
5,520,102	-		Pf6N2E2_4778	0.13	+0.9
5,520,102	-		Pf6N2E2_4778	0.13	-2.0
5,520,102	-		Pf6N2E2_4778	0.13	-1.6
5,520,102	-		Pf6N2E2_4778	0.13	-0.7
5,520,102	-		Pf6N2E2_4778	0.13	-0.5
5,520,102	-		Pf6N2E2_4778	0.13	-1.7
5,520,102	-		Pf6N2E2_4778	0.13	-1.4
5,520,102	-		Pf6N2E2_4778	0.13	-0.3
5,520,116	+		Pf6N2E2_4778	0.14	-1.0
5,520,231	-		Pf6N2E2_4778	0.21	-1.7
5,520,317	+		Pf6N2E2_4778	0.26	-1.9
5,520,317	+		Pf6N2E2_4778	0.26	-1.6
5,520,365	+		Pf6N2E2_4778	0.29	-1.1
5,520,365	+		Pf6N2E2_4778	0.29	-0.9
5,520,365	+		Pf6N2E2_4778	0.29	-0.9
5,520,365	+		Pf6N2E2_4778	0.29	-2.0
5,520,365	+		Pf6N2E2_4778	0.29	-3.1
5,520,366	-		Pf6N2E2_4778	0.29	-1.3
5,520,366	-		Pf6N2E2_4778	0.29	-0.3
5,520,485	+		Pf6N2E2_4778	0.36	-0.3
5,520,486	-		Pf6N2E2_4778	0.36	-0.9
5,520,486	-		Pf6N2E2_4778	0.36	-0.3
5,520,594	-		Pf6N2E2_4778	0.42	-1.0
5,520,594	-		Pf6N2E2_4778	0.42	-1.1
5,520,950	+		Pf6N2E2_4778	0.64	-0.2
5,520,950	+		Pf6N2E2_4778	0.64	-0.0
5,520,950	+		Pf6N2E2_4778	0.64	-1.5
5,520,950	+		Pf6N2E2_4778	0.64	-0.2
5,520,950	+		Pf6N2E2_4778	0.64	-0.9
5,521,130	+		Pf6N2E2_4778	0.74	-0.2
5,521,130	+		Pf6N2E2_4778	0.74	+0.4
5,521,130	+		Pf6N2E2_4778	0.74	-0.4
5,521,131	-		Pf6N2E2_4778	0.74	-0.8
5,521,131	-		Pf6N2E2_4778	0.74	-1.9
5,521,131	-		Pf6N2E2_4778	0.74	-1.1
5,521,131	-		Pf6N2E2_4778	0.74	-1.5
5,521,134	-		Pf6N2E2_4778	0.74	+0.7
5,521,134	-		Pf6N2E2_4778	0.74	-1.4
5,521,134	-		Pf6N2E2_4778	0.74	-1.1
5,521,134	-		Pf6N2E2_4778	0.74	-1.4
5,521,134	-		Pf6N2E2_4778	0.74	+0.6
5,521,134	-		Pf6N2E2_4778	0.74	-0.8
5,521,226	+		Pf6N2E2_4778	0.80	-0.1
5,521,227	-		Pf6N2E2_4778	0.80	-1.8
5,521,227	-		Pf6N2E2_4778	0.80	-0.3
5,521,227	-		Pf6N2E2_4778	0.80	-0.0
5,521,227	-		Pf6N2E2_4778	0.80	-1.1
5,521,232	+		Pf6N2E2_4778	0.80	-1.7
5,521,232	+		Pf6N2E2_4778	0.80	-2.5
5,521,232	+		Pf6N2E2_4778	0.80	-0.4
5,521,232	+		Pf6N2E2_4778	0.80	-0.6
5,521,233	-		Pf6N2E2_4778	0.80	-1.2
5,521,233	-		Pf6N2E2_4778	0.80	-0.7
5,521,343	+		Pf6N2E2_4778	0.87	-0.7
5,521,344	-		Pf6N2E2_4778	0.87	-0.8
5,521,379	+		Pf6N2E2_4778	0.89	-0.8
5,521,447	+				-1.7
5,521,608	-				+1.8
5,521,609	+				-0.7
5,521,609	+				-0.5
5,521,609	+				-1.3
5,521,610	-				-0.5
5,521,610	-				-0.1
5,521,630	+				-0.5
5,521,630	+				+0.3
5,521,653	-				-0.3
5,521,653	-				+0.4
5,521,663	-				+0.4
5,521,967	+		Pf6N2E2_4779	0.29	+0.2
5,521,968	-		Pf6N2E2_4779	0.30	-2.4
5,522,002	+		Pf6N2E2_4779	0.37	-1.3
5,522,002	+		Pf6N2E2_4779	0.37	-0.3
5,522,002	+		Pf6N2E2_4779	0.37	-0.2
5,522,072	+		Pf6N2E2_4779	0.52	-2.0
5,522,072	+		Pf6N2E2_4779	0.52	-0.6
5,522,072	+		Pf6N2E2_4779	0.52	-0.9
5,522,073	-		Pf6N2E2_4779	0.52	-1.2
5,522,073	-		Pf6N2E2_4779	0.52	-0.8
5,522,137	-		Pf6N2E2_4779	0.66	-1.3
5,522,325	+				-0.2
5,522,325	+				+0.2
5,522,325	+				-0.6
5,522,325	+				-0.1
5,522,325	+				-0.1
5,522,331	-				+0.7
5,522,331	-				+0.6
5,522,331	-				+0.8
5,522,331	-				+0.4
5,522,351	+				+0.4
5,522,351	+				-0.6
5,522,352	-				+0.3
5,522,352	-				+0.4
5,522,398	+				+0.1
5,522,398	+				+0.4
5,522,399	-				+0.3
5,522,399	-				+0.2
5,522,461	+				+0.4
5,522,462	-				-2.1
5,522,462	-				-0.4
5,522,539	+				-0.3
5,522,539	+				-0.4
5,522,539	+				+0.2
5,522,539	+				+0.1
5,522,539	+				+0.1
5,522,539	+				+0.4
5,522,539	+				-0.8
5,522,539	+				-0.2
5,522,539	+				-0.1
5,522,539	+				-0.2
5,522,540	-				-0.1
5,522,540	-				+0.7
5,522,540	-				-0.9
5,522,540	-				-0.6
5,522,540	-				+0.1
5,522,540	-				-0.8